From cells to chromatin: capturing snapshots of genome organization with 5C technology (Q34471294)

2 August 2017

From cells to chromatin: capturing snapshots of genome organization with 5C technology (English)

1 reference

2 August 2017

4

Job Dekker

1 reference

2 August 2017

Maria A Ferraiuolo

1

1 reference

2 August 2017

Amartya Sanyal

series ordinal

2

1 reference

2 August 2017

Natalia Naumova

series ordinal

3

1 reference

2 August 2017

Josée Dostie

series ordinal

5

1 reference

2 August 2017

5 November 2012

1 reference

2 August 2017

1 reference

2 August 2017

58

1 reference

2 August 2017

3

1 reference

2 August 2017

255-267

1 reference

Analysis of long-range chromatin interactions using Chromosome Conformation Capture

2 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

An encyclopedia of mouse DNA elements (Mouse ENCODE).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

ENCODE whole-genome data in the UCSC Genome Browser: update 2012.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Shaping the Genome with Non-Coding RNAs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

The three-dimensional folding of the α-globin gene domain reveals formation of chromatin globules

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Living without 30nm chromatin fibers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Mediator and cohesin connect gene expression and chromatin architecture

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Chromatin conformation signatures: ideal human disease biomarkers?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

The three-dimensional architecture of Hox cluster silencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Cohesin: a global player in chromosome biology with local ties to gene regulation.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

A three-dimensional model of the yeast genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

PU.1 binds to a distal regulatory element that is necessary for B cell-specific expression of CIITA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

6 July 2018

Chromosome territories

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

A CTCF-independent role for cohesin in tissue-specific transcription

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

A beta-catenin/TCF-coordinated chromatin loop at MYC integrates 5' and 3' Wnt responsive enhancers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

An oestrogen-receptor-α-bound human chromatin interactome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

CTCF: master weaver of the genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Chromatin conformation signatures of cellular differentiation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

The nuclear envelope--a scaffold for silencing?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

A large genome center's improvements to the Illumina sequencing system

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

A novel 6C assay uncovers Polycomb-mediated higher order chromatin conformations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Functional organisation of the genome during interphase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

The ENCODEdb portal: simplified access to ENCODE Consortium data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Mapping networks of physical interactions between genomic elements using 5C technology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Interchromosomal associations between alternatively expressed loci

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Proximity among distant regulatory elements at the beta-globin locus requires GATA-1 and FOG-1.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Capturing chromosome conformation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Computing chromosome conformation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3874844

Looping and interaction between hypersensitive sites in the active beta-globin locus

27 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.10.011

The beta-globin nuclear compartment in development and erythroid differentiation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.10.011

The active spatial organization of the beta-globin locus requires the transcription factor EKLF

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.10.011

Genome-wide scanning of HoxB1-associated loci in mouse ES cells using an open-ended Chromosome Conformation Capture methodology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.10.011

Global identification of yeast chromosome interactions using Genome conformation capture

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.10.011

An evaluation of 3C-based methods to capture DNA interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.10.011

The long-range interaction landscape of gene promoters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.10.011

A Torrent of data: mapping chromatin organization using 5C and high-throughput sequencing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.10.011

My5C: web tools for chromosome conformation capture studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMETH.2012.10.011

Chromosome conformation capture carbon copy technology

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23137922

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.YMETH.2012.10.011

1 reference

2 August 2017

1 reference

2 August 2017

1 reference