CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers. (Q34471973)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25879410%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

title

CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers (English)

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5 March 2020

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1

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5 March 2020

author name string

Steve Wanamaker

series ordinal

2

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5 March 2020

Timothy J Close

series ordinal

3

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5 March 2020

Stefano Lonardi

series ordinal

4

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5 March 2020

language of work or name

English

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publication date

25 March 2015

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5 March 2020

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5 March 2020

volume

16

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5 March 2020

page(s)

236

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Creative Commons Attribution 2.0 Generic

5 March 2020

issue

1

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copyright license

start time

25 March 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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1 reference

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Kraken: ultrafast metagenomic sequence classification using exact alignments

6 July 2018

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Strain/species identification in metagenomes using genome-specific markers

6 July 2018

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6 July 2018

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6 July 2018

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Scalable metagenomic taxonomy classification using a reference genome database

6 July 2018

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6 July 2018

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Combinatorial pooling enables selective sequencing of the barley gene space

6 July 2018

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SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

6 July 2018

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A physical, genetic and functional sequence assembly of the barley genome

6 July 2018

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Chromosomes in the flow to simplify genome analysis

6 July 2018

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A framework for human microbiome research

6 July 2018

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Structure, function and diversity of the healthy human microbiome

6 July 2018

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Metagenomic microbial community profiling using unique clade-specific marker genes

6 July 2018

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A comparative evaluation of sequence classification programs

6 July 2018

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Accurate and fast estimation of taxonomic profiles from metagenomic shotgun sequences

6 July 2018

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PhymmBL expanded: confidence scores, custom databases, parallelization and more

6 July 2018

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Taxonomic metagenome sequence assignment with structured output models

6 July 2018

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NBC: the Naive Bayes Classification tool webserver for taxonomic classification of metagenomic reads

6 July 2018

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Development and implementation of high-throughput SNP genotyping in barley

6 July 2018

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Use of simulated data sets to evaluate the fidelity of metagenomic processing methods

6 July 2018

1 reference

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6 July 2018

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Microbes on the human vaginal epithelium

6 July 2018

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Environmental genome shotgun sequencing of the Sargasso Sea

6 July 2018

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6 July 2018

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6 July 2018

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6 July 2018

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The identification of vaginal Lactobacillus species and the demographic and microbiologic characteristics of women colonized by these species

6 July 2018

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6 July 2018

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6 July 2018

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10.1186/S12864-015-1419-2

27 October 2018

Identifiers

DOI

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5 March 2020

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