Molecular modeling study on tunnel behavior in different histone deacetylase isoforms (Q34499630)

2 August 2017

Molecular modeling study on tunnel behavior in different histone deacetylase isoforms (English)

1 reference

2 August 2017

Sundarapandian Thangapandian

1

1 reference

2 August 2017

Shalini John

2

1 reference

2 August 2017

Yuno Lee

3

1 reference

2 August 2017

Venkatesh Arulalapperumal

4

1 reference

2 August 2017

Keun Woo Lee

5

1 reference

2 August 2017

language of work or name

English

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publication date

29 November 2012

1 reference

2 August 2017

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2 August 2017

7

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2 August 2017

e49327

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2 August 2017

11

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Creative Commons Attribution 4.0 International

2 August 2017

start time

29 November 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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On the inhibition of histone deacetylase 8

7 July 2018

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Vitamin D receptor agonist/histone deacetylase inhibitor molecular hybrids

7 July 2018

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Computational studies on the histone deacetylases and the design of selective histone deacetylase inhibitors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Structural and functional analysis of the human HDAC4 catalytic domain reveals a regulatory structural zinc-binding domain

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Comparative protein structure modeling using MODELLER

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Human HDAC7 Harbors a Class IIa Histone Deacetylase-specific Zinc Binding Motif and Cryptic Deacetylase Activity

7 July 2018

1 reference

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Histone deacetylase inhibitors: from bench to clinic

7 July 2018

1 reference

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Substrate binding to histone deacetylases as shown by the crystal structure of the HDAC8-substrate complex

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Histone deacetylase inhibitors: molecular mechanisms of action

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Chemistry of acetyl transfer by histone modifying enzymes: structure, mechanism and implications for effector design

7 July 2018

1 reference

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ProSA-web: interactive web service for the recognition of errors in three-dimensional structures of proteins

7 July 2018

1 reference

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Anticancer activities of histone deacetylase inhibitors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

7 July 2018

Chromatin architecture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Targeting histone deacetylase in cancer therapy

7 July 2018

1 reference

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GROMACS: fast, flexible, and free

7 July 2018

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Epigenetic and chromatin modifiers as targeted therapy of hematologic malignancies

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Crystal structure of a eukaryotic zinc-dependent histone deacetylase, human HDAC8, complexed with a hydroxamic acid inhibitor

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Class I histone deacetylase-selective novel synthetic inhibitors potently inhibit human tumor proliferation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

BLAST: at the core of a powerful and diverse set of sequence analysis tools

7 July 2018

1 reference

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UniProt: the Universal Protein knowledgebase

7 July 2018

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Sir2: an NAD-dependent histone deacetylase that connects chromatin silencing, metabolism, and aging

7 July 2018

1 reference

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Histone acetylation and disease

7 July 2018

1 reference

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25 years after the nucleosome model: chromatin modifications

7 July 2018

1 reference

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Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins

7 July 2018

1 reference

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Therapeutic targeting of transcription in acute promyelocytic leukemia by use of an inhibitor of histone deacetylase.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Comparative protein modeling by satisfaction of spatial restraints

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Errors in protein structures

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3510210

Molecular evolution of the histone deacetylase family: functional implications of phylogenetic analysis.

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049327

Structural origin of selectivity in class II-selective histone deacetylase inhibitors

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049327

Structural snapshots of human HDAC8 provide insights into the class I histone deacetylases

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049327

PROCHECK: a program to check the stereochemical quality of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0049327

Core histone hyperacetylation impacts cooperative behavior and high-affinity binding of histone H1 to chromatin

21 January 2018

1 reference

12 December 2020

HDAC6 deacetylation of tubulin modulates dynamics of cellular adhesions

1 reference

12 December 2020

Substrate and inhibitor specificity of class 1 and class 2 histone deacetylases

1 reference

12 December 2020

Ligand and structure based pharmacophore modeling to facilitate novel histone deacetylase 8 inhibitor design

1 reference

12 December 2020

Molecular docking study of the interactions between the thioesterase domain of human fatty acid synthase and its ligands

1 reference

12 December 2020

Docking-enabled pharmacophore model for histone deacetylase 8 inhibitors and its application in anti-cancer drug discovery

1 reference

12 December 2020

Toward selective histone deacetylase inhibitor design: homology modeling, docking studies, and molecular dynamics simulations of human class I histone deacetylases

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0049327

Identifiers

DOI

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2 August 2017

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2 August 2017

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