RPA accumulation during class switch recombination represents 5'-3' DNA-end resection during the S-G2/M phase of the cell cycle (Q34537165)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23291097%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

title

RPA accumulation during class switch recombination represents 5'-3' DNA-end resection during the S-G2/M phase of the cell cycle (English)

1 reference

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21 February 2020

2

1 reference

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Thiago Yukio Kikuchi Oliveira

21 February 2020

6

1 reference

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21 February 2020

Philipp C Rommel

7

1 reference

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21 February 2020

3

Wolfgang Resch

1 reference

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21 February 2020

author name string

Arito Yamane

1

1 reference

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21 February 2020

Anne Bothmer

4

1 reference

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21 February 2020

Hirotaka Nakahashi

5

1 reference

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21 February 2020

Eric J Brown

8

1 reference

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21 February 2020

Andre Nussenzweig

9

1 reference

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21 February 2020

Rafael Casellas

11

1 reference

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21 February 2020

Michel C Nussenzweig

10

1 reference

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21 February 2020

publication date

3 January 2013

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21 February 2020

1 reference

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21 February 2020

volume

3

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21 February 2020

issue

1

1 reference

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21 February 2020

page(s)

138-147

1 reference

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Activation-induced cytidine deaminase-initiated off-target DNA breaks are detected and resolved during S phase.

21 February 2020

cites work

1 reference

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Ectopic restriction of DNA repair reveals that UNG2 excises AID-induced uracils predominantly or exclusively during G1 phase

7 July 2018

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7 July 2018

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DNA damage defines sites of recurrent chromosomal translocations in B lymphocytes

7 July 2018

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The response to and repair of RAG-mediated DNA double-strand breaks

7 July 2018

1 reference

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Oncogenic stress sensitizes murine cancers to hypomorphic suppression of ATR

7 July 2018

1 reference

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Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells

7 July 2018

1 reference

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Translocation-capture sequencing reveals the extent and nature of chromosomal rearrangements in B lymphocytes

7 July 2018

1 reference

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Double-strand break end resection and repair pathway choice

7 July 2018

1 reference

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Regulation of DNA end joining, resection, and immunoglobulin class switch recombination by 53BP1.

7 July 2018

1 reference

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The RNA exosome targets the AID cytidine deaminase to both strands of transcribed duplex DNA substrates

7 July 2018

1 reference

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Mechanisms that promote and suppress chromosomal translocations in lymphocytes

7 July 2018

1 reference

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H2AX prevents CtIP-mediated DNA end resection and aberrant repair in G1-phase lymphocytes.

7 July 2018

1 reference

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Uracil residues dependent on the deaminase AID in immunoglobulin gene variable and switch regions

7 July 2018

1 reference

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Deep-sequencing identification of the genomic targets of the cytidine deaminase AID and its cofactor RPA in B lymphocytes

7 July 2018

1 reference

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Activation-induced cytidine deaminase targets DNA at sites of RNA polymerase II stalling by interaction with Spt5

7 July 2018

1 reference

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The role of mechanistic factors in promoting chromosomal translocations found in lymphoid and other cancers

7 July 2018

1 reference

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Widespread genomic breaks generated by activation-induced cytidine deaminase are prevented by homologous recombination

7 July 2018

1 reference

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Multiple roles of ATM in monitoring and maintaining DNA integrity

7 July 2018

1 reference

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Replication protein A: directing traffic at the intersection of replication and repair

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

The in vivo pattern of binding of RAG1 and RAG2 to antigen receptor loci.

7 July 2018

1 reference

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53BP1 regulates DNA resection and the choice between classical and alternative end joining during class switch recombination

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

53BP1 inhibits homologous recombination in Brca1-deficient cells by blocking resection of DNA breaks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

AID produces DNA double-strand breaks in non-Ig genes and mature B cell lymphomas with reciprocal chromosome translocations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

A simple method for directional transcriptome sequencing using Illumina technology

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

S region sequence, RNA polymerase II, and histone modifications create chromatin accessibility during class switch recombination

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Immunoglobulin switch mu sequence causes RNA polymerase II accumulation and reduces dA hypermutation.

7 July 2018

1 reference

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Single-stranded DNA orchestrates an ATM-to-ATR switch at DNA breaks

7 July 2018

1 reference

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Specific recruitment of protein kinase A to the immunoglobulin locus regulates class-switch recombination

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

AID is required for the chromosomal breaks in c-myc that lead to c-myc/IgH translocations

7 July 2018

1 reference

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53BP1 facilitates long-range DNA end-joining during V(D)J recombination

7 July 2018

1 reference

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Sae2, Exo1 and Sgs1 collaborate in DNA double-strand break processing

7 July 2018

1 reference

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Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Checkpoint-dependent phosphorylation of Exo1 modulates the DNA damage response

7 July 2018

1 reference

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Mechanism and regulation of class switch recombination

7 July 2018

1 reference

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Mechanism of eukaryotic homologous recombination

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

ATM prevents the persistence and propagation of chromosome breaks in lymphocytes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

The in vivo pattern of AID targeting to immunoglobulin switch regions deduced from mutation spectra in msh2-/- ung-/- mice

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

ATM stabilizes DNA double-strand-break complexes during V(D)J recombination.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Mechanism and control of V(D)J recombination at the immunoglobulin heavy chain locus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

ATM- and cell cycle-dependent regulation of ATR in response to DNA double-strand breaks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Mismatch recognition and uracil excision provide complementary paths to both Ig switching and the A/T-focused phase of somatic mutation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Replication protein A interacts with AID to promote deamination of somatic hypermutation targets

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

The role of the non-homologous end-joining pathway in lymphocyte development

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Increased postischemic brain injury in mice deficient in uracil-DNA glycosylase

7 July 2018

1 reference

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Mechanism of 5'-directed excision in human mismatch repair

7 July 2018

1 reference

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H2AX is required for recombination between immunoglobulin switch regions but not for intra-switch region recombination or somatic hypermutation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes

7 July 2018

1 reference

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p53 Binding protein 53BP1 is required for DNA damage responses and tumor suppression in mice

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Essential and dispensable roles of ATR in cell cycle arrest and genome maintenance

7 July 2018

1 reference

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DNA damage activates ATM through intermolecular autophosphorylation and dimer dissociation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Internal IgH class switch region deletions are position-independent and enhanced by AID expression

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Molecular mechanism of class switch recombination: linkage with somatic hypermutation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

AID is required to initiate Nbs1/gamma-H2AX focus formation and mutations at sites of class switching

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Mechanism underlying replication protein a stimulation of DNA ligase I.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Mechanisms of chromosomal translocations in B cell lymphomas

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Regulation of Saccharomyces Rad53 checkpoint kinase during adaptation from DNA damage-induced G2/M arrest.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Response to RAG-mediated VDJ cleavage by NBS1 and gamma-H2AX

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

The RAG proteins and V(D)J recombination: complexes, ends, and transposition

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Megabase chromatin domains involved in DNA double-strand breaks in vivo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Replication protein A stimulates long patch DNA base excision repair

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

BCL-6 mutations in normal germinal center B cells: evidence of somatic hypermutation acting outside Ig loci

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Rad52 protein stimulates DNA strand exchange by Rad51 and replication protein A

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

The evolutionarily conserved zinc finger motif in the largest subunit of human replication protein A is required for DNA replication and mismatch repair but not for nucleotide excision repair

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Atm-deficient mice: a paradigm of ataxia telangiectasia

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

DNA strand exchange mediated by a RAD51-ssDNA nucleoprotein filament with polarity opposite to that of RecA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

MSH2 deficient mice are viable and susceptible to lymphoid tumours

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Directed Ig class switch recombination in activated murine B cells.

7 July 2018

1 reference

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DMC1: a meiosis-specific yeast homolog of E. coli recA required for recombination, synaptonemal complex formation, and cell cycle progression

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Discovery of potent and selective inhibitors of ataxia telangiectasia mutated and Rad3 related (ATR) protein kinase as potential anticancer agents.

7 July 2018

1 reference

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Two levels of protection for the B cell genome during somatic hypermutation.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Activation-induced cytidine deaminase-dependent DNA breaks in class switch recombination occur during G1 phase of the cell cycle and depend upon mismatch repair

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Deletion of the IgH intronic enhancer and associated matrix-attachment regions decreases, but does not abolish, class switching at the mu locus

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Mutation of BCL-6 gene in normal B cells by the process of somatic hypermutation of Ig genes.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3563767

Histone H2AX: a dosage-dependent suppressor of oncogenic translocations and tumors

27 October 2018

1 reference

12 December 2020

Switch region content of hybridomas: the two spleen cell Igh loci tend to rearrange to the same isotype

1 reference

12 December 2020

1 reference

12 December 2020

Independent control of immunoglobulin switch recombination at individual switch regions evidenced through Cre-loxP-mediated gene targeting

1 reference

12 December 2020

DNA structure-dependent requirements for yeast RAD genes in gene conversion

1 reference

12 December 2020

Somatic hypermutation of immunoglobulin genes is linked to transcription initiation

1 reference

12 December 2020

10.1016/J.CELREP.2012.12.006

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23291097%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23291097%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

1 reference

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