The separation between the 5'-3' ends in long RNA molecules is short and nearly constant (Q34712089)

4 August 2017

title

The separation between the 5'-3' ends in long RNA molecules is short and nearly constant (English)

1 reference

4 August 2017

author name string

Nehemías Leija-Martínez

1

1 reference

4 August 2017

Sergio Casas-Flores

2

1 reference

4 August 2017

Rubén D Cadena-Nava

3

1 reference

4 August 2017

Joan A Roca

4

1 reference

4 August 2017

José A Mendez-Cabañas

5

1 reference

4 August 2017

Eduardo Gomez

6

1 reference

4 August 2017

Jaime Ruiz-Garcia

7

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4 August 2017

language of work or name

English

0 references

publication date

26 November 2014

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4 August 2017

published in

Nucleic Acids Research

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4 August 2017

volume

42

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4 August 2017

issue

22

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4 August 2017

page(s)

13963-13968

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Creative Commons Attribution 4.0 International

4 August 2017

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Mathematical modeling and comparison of protein size distribution in different plant, animal, fungal and microbial species reveals a negative correlation between protein size and protein number, thus providing insight into the evolution of proteomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Self-assembly of viral capsid protein and RNA molecules of different sizes: requirement for a specific high protein/RNA mass ratio

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Ionic strength-dependent persistence lengths of single-stranded RNA and DNA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

The genome portal of the Department of Energy Joint Genome Institute

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Discovery and annotation of small proteins using genomics, proteomics, and computational approaches

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

The roles of RNA in the synthesis of protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

The ends of a large RNA molecule are necessarily close

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Regulatory roles of natural antisense transcripts

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Predicting the sizes of large RNA molecules.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Cap-independent translation of plant viral RNAs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

A complete survey of Trichoderma chitinases reveals three distinct subgroups of family 18 chitinases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Protein length in eukaryotic and prokaryotic proteomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Long-Range RNA-RNA Interactions Circularize the Dengue Virus Genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Structural RNA has lower folding energy than random RNA of the same dinucleotide frequency

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Regulation of cap-dependent translation by eIF4E inhibitory proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

MicroRNAs: small RNAs with a big role in gene regulation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

A statistical sampling algorithm for RNA secondary structure prediction

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Vienna RNA secondary structure server

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Mfold web server for nucleic acid folding and hybridization prediction

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Fine Mapping of a cis-Acting Sequence Element in Yellow Fever Virus RNA That Is Required for RNA Replication and Cyclization

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

The chemical repertoire of natural ribozymes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

The European Large Subunit Ribosomal RNA Database

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Measuring conformational dynamics of biomolecules by single molecule fluorescence spectroscopy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

On the role of magnesium ions in RNA stability

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Compilation of tRNA sequences and sequences of tRNA genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Characterization of ech-42, a Trichoderma harzianum endochitinase gene expressed during mycoparasitism

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Alternative splicing caused by RNA secondary structure.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Infectious in vitro transcripts from cowpea chlorotic mottle virus cDNA clones and exchange of individual RNA components with brome mosaic virus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Local stability of DNA and RNA secondary structure and its relation to biological functions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Titin, a huge, elastic sarcomeric protein with a probable role in morphogenesis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

Transcription termination at the trp operon attenuators of Escherichia coli and Salmonella typhimurium: RNA secondary structure and regulation of termination

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4267660

The end-to-end distance of RNA as a randomly self-paired polymer.

7 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU1249

Expected distance between terminal nucleotides of RNA secondary structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU1249

The 5'-3' distance of RNA secondary structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU1249

Rapid blue light regulation of a Trichoderma harzianum photolyase gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU1249

Statistics of RNA secondary structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKU1249

Flexibility of single-stranded DNA: use of gapped duplex helices to determine the persistence lengths of poly(dT) and poly(dA)

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25428360

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Accurate distance determination of nucleic acids via Förster resonance energy transfer: implications of dye linker length and rigidity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25428360

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKU1249

1 reference

4 August 2017

1 reference

4 August 2017

1 reference