Understanding the enormous diversity of bacteriophages: the tailed phages that infect the bacterial family Enterobacteriaceae (Q34995724)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240328%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

title

Understanding the enormous diversity of bacteriophages: the tailed phages that infect the bacterial family Enterobacteriaceae (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240328%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240328%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

Sherwood Casjens

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240328%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

author name string

Julianne H Grose

series ordinal

1

1 reference

PubMed ID

25240328

5 August 2017

Sherwood R Casjens

series ordinal

2

1 reference

PubMed ID

25240328

5 August 2017

language of work or name

English

0 references

publication date

1 November 2014

1 reference

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16 February 2020

number of pages

23

1 reference

based on heuristic

inferred from page(s)

published in

Virology

1 reference

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16 February 2020

volume

468-470

1 reference

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16 February 2020

page(s)

421-443

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240328%20AND%20SRC:MED&resulttype=core&format=json

The genomes, proteomes, and structures of three novel phages that infect the Bacillus cereus group and carry putative virulence factors

16 February 2020

cites work

1 reference

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Three-dimensional reconstructions of the bacteriophage CUS-3 virion reveal a conserved coat protein I-domain but a distinct tailspike receptor-binding domain.

8 July 2018

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Multiple Functional Roles of the Accessory I-Domain of Bacteriophage P22 Coat Protein Revealed by NMR Structure and CryoEM Modeling

8 July 2018

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Modeling the infection dynamics of bacteriophages in enteric Escherichia coli: estimating the contribution of transduction to antimicrobial gene spread

8 July 2018

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Complete Genome Sequence of Phage-Like Plasmid pECOH89, Encoding CTX-M-15

8 July 2018

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Mycobacteriophages: windows into tuberculosis

8 July 2018

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Temperate phages acquire DNA from defective prophages by relaxed homologous recombination: the role of Rad52-like recombinases

8 July 2018

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The agricultural antibiotic carbadox induces phage-mediated gene transfer in Salmonella.

8 July 2018

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First genome sequences of Achromobacter phages reveal new members of the N4 family

8 July 2018

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A new topology of the HK97-like fold revealed in Bordetella bacteriophage by cryoEM at 3.5 Å resolution

8 July 2018

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Complete genome sequences of 63 mycobacteriophages

8 July 2018

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Phage-based nanomaterials for biomedical applications

8 July 2018

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Phage cluster relationships identified through single gene analysis.

8 July 2018

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Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome

8 July 2018

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Importance of prophages to evolution and virulence of bacterial pathogens

8 July 2018

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Engineering nanocages with polyglutamate domains for coupling to hydroxyapatite biomaterials and allograft bone

8 July 2018

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PET Imaging and biodistribution of chemically modified bacteriophage MS2.

8 July 2018

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8 July 2018

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Complete genome sequence of IME15, the first T7-like bacteriophage lytic to pan-antibiotic-resistant Stenotrophomonas maltophilia

8 July 2018

1 reference

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On the nature of mycobacteriophage diversity and host preference

8 July 2018

1 reference

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Complete genome sequence of bacteriophage SSU5 specific for Salmonella enterica serovar Typhimurium rough strains

8 July 2018

1 reference

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Bacteriophage protein-protein interactions

8 July 2018

1 reference

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P22 viral capsids as nanocomposite high-relaxivity MRI contrast agents

8 July 2018

1 reference

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Sequence and Structural Characterization of Great Salt Lake Bacteriophage CW02, a Member of the T7-Like Supergroup

8 July 2018

1 reference

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Bacteriophages with the ability to degrade uropathogenic Escherichia coli biofilms

8 July 2018

1 reference

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Virus scaffolds as enzyme nano-carriers

8 July 2018

1 reference

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Bacteriophage-encoded bacterial virulence factors and phage-pathogenicity island interactions

8 July 2018

1 reference

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Structural evolution of the P22-like phages: comparison of Sf6 and P22 procapsid and virion architectures.

8 July 2018

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Tail morphology controls DNA release in two Salmonella phages with one lipopolysaccharide receptor recognition system

8 July 2018

1 reference

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Bacteriophages and nanostructured materials

8 July 2018

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The NCBI Taxonomy database

8 July 2018

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Role of bacteriophage-encoded exotoxins in the evolution of bacterial pathogens.

8 July 2018

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Genomic analysis of bacteriophage ESP2949-1, which is virulent for Cronobacter sakazakii

8 July 2018

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Phamerator: a bioinformatic tool for comparative bacteriophage genomics

8 July 2018

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Genomic sequence analysis of virulent Cronobacter sakazakii bacteriophage ES2.

8 July 2018

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Species Numbers in Bacteria

8 July 2018

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Isolation of generalized transducing bacteriophages for uropathogenic strains of Escherichia coli

8 July 2018

1 reference

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Novel virulent and broad-host-range Erwinia amylovora bacteriophages reveal a high degree of mosaicism and a relationship to Enterobacteriaceae phages

8 July 2018

1 reference

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Bacteriophages LIMElight and LIMEzero of Pantoea agglomerans, belonging to the "phiKMV-like viruses".

8 July 2018

1 reference

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Evolution of mosaically related tailed bacteriophage genomes seen through the lens of phage P22 virion assembly.

8 July 2018

1 reference

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Genomes of the T4-related bacteriophages as windows on microbial genome evolution

8 July 2018

1 reference

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A conserved acetyl esterase domain targets diverse bacteriophages to the Vi capsular receptor of Salmonella enterica serovar Typhi

8 July 2018

1 reference

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Gene network visualization and quantitative synteny analysis of more than 300 marine T4-like phage scaffolds from the GOS metagenome

8 July 2018

1 reference

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Comparative genomic analysis of 60 Mycobacteriophage genomes: genome clustering, gene acquisition, and gene size

8 July 2018

1 reference

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Data mining pathogen genomes using GeneOrder and CoreGenes and CGUG: gene order, synteny and in silico proteomes

8 July 2018

1 reference

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Classification of Myoviridae bacteriophages using protein sequence similarity

8 July 2018

1 reference

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Bacteriophages encode factors required for protection in a symbiotic mutualism

8 July 2018

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Construction of bacteriophage phi29 DNA packaging motor and its applications in nanotechnology and therapy

8 July 2018

1 reference

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Phylogenomics and protein signatures elucidating the evolutionary relationships among the Gammaproteobacteria

8 July 2018

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Determining DNA packaging strategy by analysis of the termini of the chromosomes in tailed-bacteriophage virions

8 July 2018

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NCBI Reference Sequences: current status, policy and new initiatives

8 July 2018

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Molecular characterization of the Salmonella enterica serovar Typhi Vi-typing bacteriophage E1.

8 July 2018

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Structure of the Receptor-Binding Protein of Bacteriophage Det7: a Podoviral Tail Spike in a Myovirus

8 July 2018

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Marine viruses--major players in the global ecosystem

8 July 2018

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Clustal W and Clustal X version 2.0

8 July 2018

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The genome of epsilon15, a serotype-converting, Group E1 Salmonella enterica-specific bacteriophage

8 July 2018

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Bacteriophage-Resistant Mutants in Escherichia Coli.

8 July 2018

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Mutations of Bacteria from Virus Sensitivity to Virus Resistance

8 July 2018

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Exploring the mycobacteriophage metaproteome: phage genomics as an educational platform

8 July 2018

1 reference

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Virus-enabled synthesis and assembly of nanowires for lithium ion battery electrodes

8 July 2018

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Introduction of transposon Tn5 into Myxococcus for analysis of developmental and other nonselectable mutants

8 July 2018

1 reference

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Comparative analysis of tandem T7-like promoter containing regions in enterobacterial genomes reveals a novel group of genetic islands.

8 July 2018

1 reference

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Kalign--an accurate and fast multiple sequence alignment algorithm

8 July 2018

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The genome of bacteriophage K1F, a T7-like phage that has acquired the ability to replicate on K1 strains of Escherichia coli

8 July 2018

1 reference

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8 July 2018

1 reference

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Marine T4-type bacteriophages, a ubiquitous component of the dark matter of the biosphere

8 July 2018

1 reference

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Comparative genomics and evolution of the tailed-bacteriophages.

8 July 2018

1 reference

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The viriosphere, diversity, and genetic exchange within phage communities

8 July 2018

1 reference

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Evolutionary relationships of three new species of Enterobacteriaceae living as symbionts of aphids and other insects

8 July 2018

1 reference

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The impact of prophages on bacterial chromosomes

8 July 2018

1 reference

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Complete genomic sequence of the virulent Salmonella bacteriophage SP6.

8 July 2018

1 reference

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8 July 2018

Bacteriophage genomics

1 reference

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General nature of the genetic code for proteins

8 July 2018

1 reference

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Independent functions of viral protein and nucleic acid in growth of bacteriophage

8 July 2018

1 reference

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Prophages and bacterial genomics: what have we learned so far?

8 July 2018

1 reference

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Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches

8 July 2018

1 reference

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Bacteriophages: evolution of the majority

8 July 2018

1 reference

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A bacteriophage reagent for Salmonella: molecular studies on Felix 01.

8 July 2018

1 reference

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Bacteriophage SP6 is closely related to phages K1-5, K5, and K1E but encodes a tail protein very similar to that of the distantly related P22.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

CoreGenes: a computational tool for identifying and cataloging "core" genes in a set of small genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Phage genomics: small is beautiful

8 July 2018

1 reference

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A conserved genetic module that encodes the major virion components in both the coliphage T4 and the marine cyanophage S-PM2

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Sequence of the genome of the temperate, serotype-converting, Pseudomonas aeruginosa bacteriophage D3

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Genomic sequences of bacteriophages HK97 and HK022: pervasive genetic mosaicism in the lambdoid bacteriophages

8 July 2018

1 reference

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An efficient recombination system for chromosome engineering in Escherichia coli

8 July 2018

1 reference

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Virioplankton: Viruses in Aquatic Ecosystems

8 July 2018

1 reference

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Prevalence of broad-host-range lytic bacteriophages of Sphaerotilus natans, Escherichia coli, and Pseudomonas aeruginosa

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 A, fully refined structure of the endorhamnosidase at 1.56 A resolution, and the molecular basis of O-antigen recognition and cleavage

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

DNA Strider. An inexpensive sequence analysis package for the Macintosh.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Evidence for shorter average O-polysaccharide chainlength in the lipopolysaccharide of a bacteriophage Felix 01-sensitive variant of Salmonella anatum A1.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Transposon mutagenesis of marine Vibrio spp

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Nucleotide sequence of bacteriophage lambda DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

High abundance of viruses found in aquatic environments.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Basic local alignment search tool

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Recombination and modular exchange in the genesis of new lambdoid phages

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

DNA inversion regions Min of plasmid p15B and Cin of bacteriophage P1: evolution of bacteriophage tail fiber genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

DNA sequences of the tail fiber genes of bacteriophage P2: evidence for horizontal transfer of tail fiber genes among unrelated bacteriophages

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Directed self-assembly of CdS quantum dots on bacteriophage P22 coat protein templates

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Bacterial viruses or bacteriophages.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Typing of Paratyphoid B Bacilli by Vi Bacteriophage.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Phylogeny and prediction of genetic similarity of Cronobacter and related taxa by multilocus sequence analysis (MLSA).

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Characterization of bacteriophages used in the Salmonella enterica serovar Enteritidis phage-typing scheme

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Global-scale processes with a nanoscale drive: the role of marine viruses.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Detection of Salmonella by bacteriophage Felix 01.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Salmonella host range of bacteriophages that infect multiple genera.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

THE ACTIVITY OF A BACTERIOSTATIC SUBSTANCE IN THE REACTION BETWEEN BACTERIAL VIRUS AND HOST.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Gepard: a rapid and sensitive tool for creating dotplots on genome scale.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Expression of genes of prophage P1 Escherichia coli in cells of phytopathogenic Erwinia

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

A selective barrier to horizontal gene transfer in the T4-type bacteriophages that has preserved a core genome with the viral replication and structural genes

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Evolution of bacteriophages infecting encapsulated bacteria: lessons from Escherichia coli K1-specific phages.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Estimation of biologically damaging UV levels in marine surface waters with DNA and viral dosimeters

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

A theory of modular evolution for bacteriophages

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Genomic sequence and analysis of the atypical temperate bacteriophage N15 1 1Edited by M. Gottesman

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4301999

Phage-mediated intergeneric transfer of toxin genes

9 December 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.08.024

Information theory based T7-like promoter models: classification of bacteriophages and differential evolution of promoters and their polymerases.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.08.024

Modular architecture of the T4 phage superfamily: a conserved core genome and a plastic periphery

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.08.024

Santa Rosalia revisited: why are there so many species of bacteria?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.08.024

Unexpected relationships between bacteriophage lambda hypothetical proteins and bacteriophage T4 tail-fiber proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.08.024

Structure of the ends of the coliphage N4 genome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.08.024

Fabrication of ordered nanostructures of sulfide nanocrystal assemblies over self-assembled genetically engineered P22 coat protein

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.08.024

Mapping of Deletions and Substitutions in Heteroduplex DNA Molecules of Bacteriophage Lambda by Electron Microscopy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.08.024

On the Origin of Species by Means of Natural Selection, or the Preservation of Favoured Races in the Struggle for Life

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25240328

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.VIROL.2014.08.024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240328%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240328%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25240328%20AND%20SRC:MED&resulttype=core&format=json