The A-repeat links ASF/SF2-dependent Xist RNA processing with random choice during X inactivation (Q35108825)

6 August 2017

The A-repeat links ASF/SF2-dependent Xist RNA processing with random choice during X inactivation (English)

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6 August 2017

5

Anton Wutz

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6 August 2017

Morgan E Royce-Tolland

1

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6 August 2017

Angela A Andersen

2

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6 August 2017

Hannah R Koyfman

3

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6 August 2017

Dale J Talbot

4

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6 August 2017

Ian D Tonks

6

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6 August 2017

Graham F Kay

7

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6 August 2017

Barbara Panning

8

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6 August 2017

25 July 2010

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Nature Structural & Molecular Biology

6 August 2017

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6 August 2017

17

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6 August 2017

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6 August 2017

948-954

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describes a project that uses

6 August 2017

ImageQuant

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11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4336797/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/nsmb.1877

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cites work

Condensin complexes regulate mitotic progression and interphase chromatin structure in embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

2-D structure of the A region of Xist RNA and its implication for PRC2 association

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

A proximal conserved repeat in the Xist gene is essential as a genomic element for X-inactivation in mouse.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Dicer regulates Xist promoter methylation in ES cells indirectly through transcriptional control of Dnmt3a

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

SmcHD1, containing a structural-maintenance-of-chromosomes hinge domain, has a critical role in X inactivation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

X inactivation counting and choice is a stochastic process: evidence for involvement of an X-linked activator

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Antisense artifacts in transcriptome microarray experiments are resolved by actinomycin D.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

9 July 2018

X inactivation Xplained

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

The histone domain of macroH2A1 contains several dispersed elements that are each sufficient to direct enrichment on the inactive X chromosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

XIST RNA exhibits nuclear retention and exhibits reduced association with the export factor TAP/NXF1.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

X chromosomes alternate between two states prior to random X-inactivation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

A transient heterochromatic state in Xist preempts X inactivation choice without RNA stabilization

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Dephosphorylation-dependent sorting of SR splicing factors during mRNP maturation.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

X chromosome choice occurs independently of asynchronous replication timing

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

A molecular link between SR protein dephosphorylation and mRNA export

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Differential histone H3 Lys-9 and Lys-27 methylation profiles on the X chromosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Gene action in the X-chromosome of the mouse (Mus musculus L.)

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Skewing X chromosome choice by modulating sense transcription across the Xist locus

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

ESEfinder: A web resource to identify exonic splicing enhancers

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Role of histone H3 lysine 27 methylation in X inactivation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Homozygous Tsix mutant mice reveal a sex-ratio distortion and revert to random X-inactivation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Listening to silence and understanding nonsense: exonic mutations that affect splicing

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Chromosomal silencing and localization are mediated by different domains of Xist RNA.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Antisense transcription through the Xist locus mediates Tsix function in embryonic stem cells

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

X-chromosome inactivation: counting, choice and initiation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

A shift from reversible to irreversible X inactivation is triggered during ES cell differentiation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Tsix, a gene antisense to Xist at the X-inactivation centre

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Genetic analysis of the mouse X inactivation center defines an 80-kb multifunction domain

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

X chromosome inactivation is mediated by Xist RNA stabilization

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Xist has properties of the X-chromosome inactivation centre

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

DNA hypomethylation can activate Xist expression and silence X-linked genes.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Evidence that random and imprinted Xist expression is controlled by preemptive methylation.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

"Well-determined" regions in RNA secondary structure prediction: analysis of small subunit ribosomal RNA.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Conservation of position and exclusive expression of mouse Xist from the inactive X chromosome.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

The human XIST gene: analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

Role of the Xist gene in X chromosome choosing.

9 July 2018

1 reference

Stabilization of Xist RNA mediates initiation of X chromosome inactivation.

21 January 2018

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Targeted mutagenesis of Tsix leads to nonrandom X inactivation.

21 January 2018

1 reference

Tsix silences Xist through modification of chromatin structure

21 January 2018

1 reference

Methylation of histone H3 at Lys-9 is an early mark on the X chromosome during X inactivation

21 January 2018

1 reference

Tsix defective in splicing is competent to establish Xist silencing.

21 January 2018

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Characterization and quantitation of differential Tsix transcripts: implications for Tsix function

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4336797

X–chromosome inactivation during differentiation of female teratocarcinoma stem cells in vitro

27 September 2018

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Xist-deficient mice are defective in dosage compensation but not spermatogenesis

21 January 2018

1 reference

Conditional deletion of Xist disrupts histone macroH2A localization but not maintenance of X inactivation

31 March 2020

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31 March 2020

Identifiers

DOI

10.1038/NSMB.1877

1 reference

6 August 2017

1 reference

6 August 2017

1 reference