Helix 69 is key for uniformity during substrate selection on the ribosome (Q35111134)

6 August 2017

title

Helix 69 is key for uniformity during substrate selection on the ribosome (English)

1 reference

6 August 2017

Rodrigo F Ortiz-Meoz

1

1 reference

6 August 2017

Rachel Green

series ordinal

2

1 reference

6 August 2017

language of work or name

English

0 references

publication date

27 May 2011

1 reference

Journal of Biological Chemistry

6 August 2017

number of pages

7

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

6 August 2017

volume

286

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6 August 2017

issue

29

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6 August 2017

page(s)

25604-25610

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How mutations in tRNA distant from the anticodon affect the fidelity of decoding

6 August 2017

cites work

1 reference

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Control of translation efficiency in yeast by codon-anticodon interactions

9 July 2018

1 reference

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Functional elucidation of a key contact between tRNA and the large ribosomal subunit rRNA during decoding

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Recognition of the amber UAG stop codon by release factor RF1

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Visualization of codon-dependent conformational rearrangements during translation termination

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Agmatine-conjugated cytidine in a tRNA anticodon is essential for AUA decoding in archaea.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

The Crystal Structure of the Ribosome Bound to EF-Tu and Aminoacyl-tRNA

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

A sequence element that tunes Escherichia coli tRNA(Ala)(GGC) to ensure accurate decoding.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Crystal structure of a translation termination complex formed with release factor RF2

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM

9 July 2018

1 reference

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Insights into Translational Termination from the Structure of RF2 Bound to the Ribosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Different aa-tRNAs are selected uniformly on the ribosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Structural basis for translation termination on the 70S ribosome

9 July 2018

1 reference

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Structural Insights into ribosome recycling factor interactions with the 70S ribosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Pseudouridylation of helix 69 of 23S rRNA is necessary for an effective translation termination

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Crystal structure of the ribosome recycling factor bound to the ribosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Conserved loop sequence of helix 69 in Escherichia coli 23 S rRNA is involved in A-site tRNA binding and translational fidelity

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

An active role for tRNA in decoding beyond codon:anticodon pairing

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Structure of a purine-purine wobble base pair in the decoding center of the ribosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Decoding the genome: a modified view

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Recognition of cognate transfer RNA by the 30S ribosomal subunit

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Induced fit in initial selection and proofreading of aminoacyl-tRNA on the ribosome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Decoding with the A:I wobble pair is inefficient

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Codon and amino-acid specificities of a transfer RNA are both converted by a single post-transcriptional modification

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3138323

Deletion of a conserved, central ribosomal intersubunit RNA bridge

9 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.256255

The involvement of two distinct regions of 23 S ribosomal RNA in tRNA selection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.256255

Stop codon recognition by release factors induces structural rearrangement of the ribosomal decoding center that is productive for peptide release

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.256255

Affinity purification of in vivo-assembled ribosomes for in vitro biochemical analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.256255

Kinetic determinants of high-fidelity tRNA discrimination on the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.256255

Mutational analysis reveals two independent molecular requirements during transfer RNA selection on the ribosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.256255

Helix 69 in 23S rRNA modulates decoding by wild type and suppressor tRNAs

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21622559

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Pseudouridylation of 23S rRNA helix 69 promotes peptide release by release factor RF2 but not by release factor RF1

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21622559

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M111.256255

1 reference

6 August 2017

1 reference

6 August 2017

1 reference