Activity of the human immunodeficiency virus type 1 cell cycle-dependent internal ribosomal entry site is modulated by IRES trans-acting factors (Q35153487)

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English	Activity of the human immunodeficiency virus type 1 cell cycle-dependent internal ribosomal entry site is modulated by IRES trans-acting factors	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

6 August 2017

Activity of the human immunodeficiency virus type 1 cell cycle-dependent internal ribosomal entry site is modulated by IRES trans-acting factors (English)

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Europe PubMed Central

PubMed publication ID

6 August 2017

Fernando Valiente-Echeverría

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Fernando Valiente-Echeverría

7

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Marcelo López-Lastra

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Marcelo López-Lastra

10

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Maricarmen Vallejos

1

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Europe PubMed Central

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6 August 2017

Jules Deforges

2

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Europe PubMed Central

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6 August 2017

Terra-Dawn M Plank

3

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Europe PubMed Central

PubMed publication ID

6 August 2017

Alejandro Letelier

4

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Europe PubMed Central

PubMed publication ID

6 August 2017

Pablo Ramdohr

5

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Europe PubMed Central

PubMed publication ID

6 August 2017

Christopher G Abraham

6

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Europe PubMed Central

PubMed publication ID

6 August 2017

Jeffrey S Kieft

8

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Europe PubMed Central

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6 August 2017

Bruno Sargueil

9

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6 August 2017

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publication date

10 April 2011

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Europe PubMed Central

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6 August 2017

Nucleic Acids Research

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Europe PubMed Central

PubMed publication ID

6 August 2017

39

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Europe PubMed Central

PubMed publication ID

6 August 2017

14

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Europe PubMed Central

PubMed publication ID

6 August 2017

6186-6200

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Europe PubMed Central

PubMed publication ID

6 August 2017

copyright license

Creative Commons Attribution-NonCommercial 2.5 Generic

5 October 2016

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April 2022 Public Data File from Crossref

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Ribosomal scanning on the 5'-untranslated region of the human immunodeficiency virus RNA genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

Translational regulation of HIV-1 replication by HIV-1 Rev cellular cofactors Sam68, eIF5A, hRIP, and DDX3.

1 reference

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13 July 2018

The role of IRES trans-acting factors in regulating translation initiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

A conserved structure within the HIV gag open reading frame that controls translation initiation directly recruits the 40S subunit and eIF3.

1 reference

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13 July 2018

The activity of the HIV-1 IRES is stimulated by oxidative stress and controlled by a negative regulatory element

1 reference

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13 July 2018

SHAPE-directed RNA secondary structure prediction

1 reference

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The mechanism of eukaryotic translation initiation and principles of its regulation

1 reference

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A new type of IRES within gag coding region recruits three initiation complexes on HIV-2 genomic RNA

1 reference

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HIV- 1 protease inhibits Cap- and poly(A)-dependent translation upon eIF4GI and PABP cleavage

1 reference

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The 5'-untranslated region of the mouse mammary tumor virus mRNA exhibits cap-independent translation initiation

1 reference

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Mechanistic role of structurally dynamic regions in Dicistroviridae IGR IRESs

1 reference

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Human immunodeficiency virus type 1 (HIV-1) induces the cytoplasmic retention of heterogeneous nuclear ribonucleoprotein A1 by disrupting nuclear import: implications for HIV-1 gene expression

1 reference

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13 July 2018

Bridging IRES elements in mRNAs to the eukaryotic translation apparatus

1 reference

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Regulation of translation initiation in eukaryotes: mechanisms and biological targets

1 reference

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Accurate SHAPE-directed RNA structure determination

1 reference

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ShapeFinder: a software system for high-throughput quantitative analysis of nucleic acid reactivity information resolved by capillary electrophoresis

1 reference

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Relevance of RNA structure for the activity of picornavirus IRES elements

1 reference

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RNA secondary structure of the feline immunodeficiency virus 5'UTR and Gag coding region

1 reference

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Viral IRES RNA structures and ribosome interactions

1 reference

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High-throughput SHAPE analysis reveals structures in HIV-1 genomic RNA strongly conserved across distinct biological states

1 reference

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13 July 2018

The impact of RNA structure on picornavirus IRES activity.

1 reference

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Isolation of specific RNA-binding proteins using the streptomycin-binding RNA aptamer

1 reference

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A fast-acting reagent for accurate analysis of RNA secondary and tertiary structure by SHAPE chemistry

1 reference

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Translational control of retroviruses.

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Structural and mechanistic insights into hepatitis C viral translation initiation

1 reference

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Exploring RNA virus replication in Xenopus oocytes

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13 July 2018

HIV protease cleaves poly(A)-binding protein.

1 reference

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13 July 2018

The retrovirus RNA trafficking granule: from birth to maturity

1 reference

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Acetylated Tat regulates human immunodeficiency virus type 1 splicing through its interaction with the splicing regulator p32.

1 reference

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Inhibitory effect of HIV-1 Tat protein on the sodium-D-glucose symporter of human intestinal epithelial cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

Protein synthesis in eukaryotes: the growing biological relevance of cap-independent translation initiation

1 reference

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13 July 2018

Histone deacetylase 6 regulates human immunodeficiency virus type 1 infection

1 reference

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13 July 2018

Proteomic analysis of oxidatively modified proteins induced by the mitochondrial toxin 3-nitropropionic acid in human astrocytes expressing the HIV protein tat.

1 reference

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13 July 2018

HIV-1 Tat protein enhances microtubule polymerization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

Cell cycle arrest in G2 induces human immunodeficiency virus type 1 transcriptional activation through histone acetylation and recruitment of CBP, NF-kappaB, and c-Jun to the long terminal repeat promoter

1 reference

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13 July 2018

First snapshots of the HIV-1 RNA structure in infected cells and in virions.

1 reference

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13 July 2018

The Glutamine-rich Region of the HIV-1 Tat Protein Is Involved in T-cell Apoptosis

1 reference

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Dimerization of retroviral RNA genomes: an inseparable pair.

1 reference

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13 July 2018

RNA interactions in the 5' region of the HIV-1 genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

Human p32 protein relieves a post-transcriptional block to HIV replication in murine cells

1 reference

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13 July 2018

Human topoisomerase I promotes HIV-1 proviral DNA synthesis: implications for the species specificity and cellular tropism of HIV-1 infection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

The internal ribosome entry site (IRES) contained within the RNA-binding motif protein 3 (Rbm3) mRNA is composed of functionally distinct elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

The leader of human immunodeficiency virus type 1 genomic RNA harbors an internal ribosome entry segment that is active during the G2/M phase of the cell cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

Cleavage of eIF4G by HIV-1 protease: effects on translation.

1 reference

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13 July 2018

In vitro cleavage of eIF4GI but not eIF4GII by HIV-1 protease and its effects on translation in the rabbit reticulocyte lysate system

1 reference

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Messenger-RNA-binding proteins and the messages they carry

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13 July 2018

HIV-1 protease cleaves eukaryotic initiation factor 4G and inhibits cap-dependent translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

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Suppression of cap-dependent translation in mitosis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

Derivation of a structural model for the c-myc IRES

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

Two alternating structures of the HIV-1 leader RNA

1 reference

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13 July 2018

The human immunodeficiency virus type 1 gag gene encodes an internal ribosome entry site

1 reference

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Retroviral cDNA integration: stimulation by HMG I family proteins

1 reference

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HIV-1 rev depolymerizes microtubules to form stable bilayered rings

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

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Functional interaction between the HIV transactivator Tat and the transcriptional coactivator PC4 in T cells

1 reference

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Naturally occurring dicistronic cricket paralysis virus RNA is regulated by two internal ribosome entry sites

1 reference

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13 July 2018

A 9-nt segment of a cellular mRNA can function as an internal ribosome entry site (IRES) and when present in linked multiple copies greatly enhances IRES activity

1 reference

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1 reference

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Human immunodeficiency virus type 1 preintegration complexes: studies of organization and composition

1 reference

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13 July 2018

Structure and function of the human immunodeficiency virus leader RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

In vitro interaction between human immunodeficiency virus type 1 Rev protein and splicing factor ASF/SF2-associated protein, p32

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

Cleavage of human and mouse cytoskeletal and sarcomeric proteins by human immunodeficiency virus type 1 protease. Actin, desmin, myosin, and tropomyosin

1 reference

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13 July 2018

Identification of a novel human zinc finger protein that specifically interacts with the activation domain of lentiviral Tat proteins

1 reference

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Binding of Human Prothymosin α to the Leucine‐Motif/activation Domains of HTLV‐I Rex and HIV‐1 Rev

1 reference

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13 July 2018

Human immunodeficiency virus type 1 reverse transcriptase: enhancement of activity by interaction with cellular topoisomerase I.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

13 July 2018

A segment of the 5' nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation

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13 July 2018

Site-directed mutagenesis by overlap extension using the polymerase chain reaction

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13 July 2018

Terminal 7-methyl-guanosine cap structure on the normally uncapped 5' noncoding region of poliovirus mRNA inhibits its translation in mammalian cells

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The Elav-like protein HuR exerts translational control of viral internal ribosome entry sites

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27 September 2018

Lentiviral RNAs can use different mechanisms for translation initiation

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IRES-mediated pathways to polysomes: nuclear versus cytoplasmic routes

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27 September 2018

Nucleolin and the packaging signal, psi, promote the budding of human immunodeficiency virus type-1 (HIV-1).

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A novel long distance base-pairing interaction in human immunodeficiency virus type 1 RNA occludes the Gag start codon

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27 September 2018

Multiple secondary structure rearrangements during HIV-1 RNA dimerization

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27 September 2018

Topoisomerase I and ATP activate cDNA synthesis of human immunodeficiency virus type 1.

1 reference

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Anchorage of HIV on permissive cells leads to coaggregation of viral particles with surface nucleolin at membrane raft microdomains.

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27 September 2018

The HIV-1 5' LTR poly(A) site is inactivated by U1 snRNP interaction with the downstream major splice donor site.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

27 September 2018

The involvement of a spliceosome component in internal initiation of human rhinovirus RNA translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3152342

27 September 2018

The different pathways of HIV genomic RNA translation

1 reference

https://pubmed.ncbi.nlm.nih.gov/21482538

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The HIV-1 leader RNA conformational switch regulates RNA dimerization but does not regulate mRNA translation

1 reference

https://pubmed.ncbi.nlm.nih.gov/21482538

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKR189

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

ResearchGate publication ID

0 references

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