Evaluating bias-reducing protocols for RNA sequencing library preparation (Q35202622)

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8 March 2020

title

Evaluating bias-reducing protocols for RNA sequencing library preparation (English)

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8 March 2020

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1

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8 March 2020

author name string

Ruth V Spriggs

2

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8 March 2020

Nicholas J Burgoyne

3

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8 March 2020

Carolyn Jones

4

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8 March 2020

Anne E Willis

5

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8 March 2020

language of work or name

English

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publication date

7 July 2014

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8 March 2020

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8 March 2020

volume

15

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8 March 2020

page(s)

569

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Structure-function analysis of Methanobacterium thermoautotrophicum RNA ligase - engineering a thermostable ATP independent enzyme

8 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

Small RNA expression profiling by high-throughput sequencing: implications of enzymatic manipulation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

Reducing ligation bias of small RNAs in libraries for next generation sequencing

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

Summarizing and correcting the GC content bias in high-throughput sequencing

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

Structural bias in T4 RNA ligase-mediated 3'-adapter ligation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

13 July 2018

ViennaRNA Package 2.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

T4 RNA ligase 2 truncated active site mutants: improved tools for RNA analysis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

Sequencing bias: comparison of different protocols of microRNA library construction

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

RNA substrate specificity and structure-guided mutational analysis of bacteriophage T4 RNA ligase 2.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4117970

26 September 2018

Identifiers

DOI

10.1186/1471-2164-15-569

1 reference

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8 March 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25001197%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

1 reference

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