Genomes and characterization of phages Bcep22 and BcepIL02, founders of a novel phage type in Burkholderia cenocepacia (Q35274632)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21804006%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

title

Genomes and characterization of phages Bcep22 and BcepIL02, founders of a novel phage type in Burkholderia cenocepacia (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21804006%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

main subject

Burkholderia cenocepacia

object named as

Burkholderia cenocepacia

1 reference

1

1 reference

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9 February 2020

Ry Young

14

1 reference

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9 February 2020

author name string

Elizabeth J Summer

2

1 reference

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9 February 2020

William K Russell

3

1 reference

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9 February 2020

Stephanie M Cologna

4

1 reference

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9 February 2020

Thomas M Carlile

5

1 reference

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9 February 2020

Alicia C Fuller

6

1 reference

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9 February 2020

Kate Kitsopoulos

7

1 reference

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9 February 2020

Leslie M Mebane

8

1 reference

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9 February 2020

Brandi N Parkinson

9

1 reference

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9 February 2020

David Sullivan

10

1 reference

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9 February 2020

Lisa A Carmody

11

1 reference

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9 February 2020

Carlos F Gonzalez

12

1 reference

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9 February 2020

John J LiPuma

13

1 reference

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9 February 2020

language of work or name

English

0 references

publication date

29 July 2011

1 reference

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9 February 2020

published in

Journal of Bacteriology

1 reference

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9 February 2020

volume

193

1 reference

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9 February 2020

issue

19

1 reference

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9 February 2020

page(s)

5300-5313

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Classification and identification of the Burkholderia cepacia complex: Past, present and future

9 February 2020

cites work

1 reference

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Morphogenesis of the T4 tail and tail fibers

12 July 2018

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Structure of the bacteriophage T4 long tail fiber receptor-binding tip

12 July 2018

1 reference

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Decision making at a subcellular level determines the outcome of bacteriophage infection

12 July 2018

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BLAST+: architecture and applications

12 July 2018

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Efficacy of bacteriophage therapy in a model of Burkholderia cenocepacia pulmonary infection

12 July 2018

1 reference

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Inactivation of Burkholderia cepacia complex phage KS9 gp41 identifies the phage repressor and generates lytic virions

12 July 2018

1 reference

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Regulation of a muralytic enzyme by dynamic membrane topology

12 July 2018

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Structure of the lethal phage pinhole

12 July 2018

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Classification of Myoviridae bacteriophages using protein sequence similarity

12 July 2018

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Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli

12 July 2018

1 reference

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Helicobacter Pylori's plasticity zones are novel transposable elements

12 July 2018

1 reference

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Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources

12 July 2018

1 reference

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Genome evolution driven by host adaptations results in a more virulent and antimicrobial-resistant Streptococcus pneumoniae serotype 14

12 July 2018

1 reference

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Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens

12 July 2018

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Experimental bacteriophage therapy increases survival of Galleria mellonella larvae infected with clinically relevant strains of the Burkholderia cepacia complex.

12 July 2018

1 reference

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A novel integrative conjugative element mediates genetic transfer from group G Streptococcus to other {beta}-hemolytic Streptococci

12 July 2018

1 reference

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Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81

12 July 2018

1 reference

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Genomic sequence and activity of KS10, a transposable phage of the Burkholderia cepacia complex

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Preparation of a phage DNA fragment library for whole genome shotgun sequencing

12 July 2018

1 reference

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InterPro: the integrative protein signature database

12 July 2018

1 reference

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The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

The final step in the phage infection cycle: the Rz and Rz1 lysis proteins link the inner and outer membranes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Evolution of the Rhodococcus equi vap pathogenicity island seen through comparison of host-associated vapA and vapB virulence plasmids

12 July 2018

1 reference

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Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Diversity among the tailed-bacteriophages that infect the Enterobacteriaceae

12 July 2018

1 reference

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The pinholin of lambdoid phage 21: control of lysis by membrane depolarization.

12 July 2018

1 reference

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Role of phages in the pathogenesis of Burkholderia, or 'Where are the toxin genes in Burkholderia phages?'.

12 July 2018

1 reference

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Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake

12 July 2018

1 reference

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The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome

12 July 2018

1 reference

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DnaA: controlling the initiation of bacterial DNA replication and more

12 July 2018

1 reference

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VanG-type vancomycin-resistant Enterococcus faecalis strains isolated in Canada

12 July 2018

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Bacteriophage replication modules

12 July 2018

1 reference

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Divergence and mosaicism among virulent soil phages of the Burkholderia cepacia complex

12 July 2018

1 reference

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The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs

12 July 2018

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The generalized transducing Salmonella bacteriophage ES18: complete genome sequence and DNA packaging strategy

12 July 2018

1 reference

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The multifarious, multireplicon Burkholderia cepacia complex

12 July 2018

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Disulfide isomerization after membrane release of its SAR domain activates P1 lysozyme

12 July 2018

1 reference

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A universal strategy for proteomic studies of SUMO and other ubiquitin-like modifiers

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Genome of bacteriophage P1

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation

12 July 2018

1 reference

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Improved prediction of signal peptides: SignalP 3.0

12 July 2018

1 reference

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A signal-arrest-release sequence mediates export and control of the phage P1 endolysin

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Phage integrases: biology and applications

12 July 2018

1 reference

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12 July 2018

Bacteriophage genomics

1 reference

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Why is big Pharma getting out of antibacterial drug discovery?

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Diversity and significance of Burkholderia species occupying diverse ecological niches.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

The structure of the receptor-binding domain of the bacteriophage T4 short tail fibre reveals a knitted trimeric metal-binding fold

12 July 2018

1 reference

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Prediction of lipoprotein signal peptides in Gram-negative bacteria

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Role of Mobile DNA in the Evolution of Vancomycin-Resistant Enterococcus faecalis

12 July 2018

1 reference

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Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae

12 July 2018

1 reference

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Overcoming the phage replication threshold: a mathematical model with implications for phage therapy

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Isolation and mapping of self-assembling protein domains encoded by the Saccharomyces cerevisiae genome using lambda repressor fusions

12 July 2018

1 reference

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Genome Sequence of the Plant Pathogen and Biotechnology Agent Agrobacterium tumefaciens C58

12 July 2018

1 reference

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Annotated draft genomic sequence from a Streptococcus pneumoniae type 19F clinical isolate

12 July 2018

1 reference

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Artemis: sequence visualization and annotation

12 July 2018

1 reference

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Holins: the protein clocks of bacteriophage infections

12 July 2018

1 reference

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RecE/RecT and Redalpha/Redbeta initiate double-stranded break repair by specifically interacting with their respective partners

12 July 2018

1 reference

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Crystal structure of the lambda repressor C-terminal domain provides a model for cooperative operator binding

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Genomic sequences of bacteriophages HK97 and HK022: pervasive genetic mosaicism in the lambdoid bacteriophages

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Salmonella-type heptaacylated lipid A is inactive and acts as an antagonist of lipopolysaccharide action on human line cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Sequence of Shiga toxin 2 phage 933W from Escherichia coli O157:H7: Shiga toxin as a phage late-gene product

12 July 2018

1 reference

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Accessory genes in the darA operon of bacteriophage P1 affect antirestriction function, generalized transduction, head morphogenesis, and host cell lysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Lipid A acylation and bacterial resistance against vertebrate antimicrobial peptides.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

12 July 2018

1 reference

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GeneMark.hmm: new solutions for gene finding

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Plasmid pKM101 encodes two nonhomologous antirestriction proteins (ArdA and ArdB) whose expression is controlled by homologous regulatory sequences

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Homologous pairing and strand exchange promoted by the Escherichia coli RecT protein

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Distribution of the ardA family of antirestriction genes on conjugative plasmids

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

12 July 2018

1 reference

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Regulation of glutamine synthetase. XII. Electron microscopy of the enzyme from Escherichia coli.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Mutants of bacteriophage lambda unable to integrate into the host chromosome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Receptor specificity of the short tail fibres (gp12) of T-even type Escherichia coli phages.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Different interactions used by Cro repressor in specific and nonspecific DNA binding

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Clinical, experimental, and genomic differences between intermediately pathogenic, highly pathogenic, and epidemic Streptococcus suis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Rz/Rz1 lysis gene equivalents in phages of Gram-negative hosts.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Burkholderia cenocepacia phage BcepMu and a family of Mu-like phages encoding potential pathogenesis factors

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Lysogeny and bacteriophage host range within the Burkholderia cepacia complex

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Bacteriophage Mu genome sequence: analysis and comparison with Mu-like prophages in Haemophilus, Neisseria and Deinococcus.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

26 September 2018

Bacteriophage Therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Antirestriction protein Ard (Type C) encoded by IncW plasmid pSa has a high similarity to the "protein transport" domain of TraC1 primase of promiscuous plasmid RP4.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Phage Proteomics: Applications of Mass Spectrometry

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3187461

Peptidoglycan hydrolytic activities associated with bacteriophage virions

15 November 2018

1 reference

12 December 2020

Isolation and characterization of bacteriophages of the Burkholderia cepacia complex

1 reference

12 December 2020

Integration-negative mutants of bacteriophage lambda

1 reference

12 December 2020

Lysogenization by bacteriophage lambda. I. Multiple infection and the lysogenic response

1 reference

12 December 2020

Two DNA antirestriction systems of bacteriophage P1, darA, and darB: characterization of darA- phages

1 reference

12 December 2020

Sensitivity of the Burkholderia cepacia complex and Pseudomonas aeruginosa to transducing bacteriophages

1 reference

12 December 2020

Role of the Gp16 lytic transglycosylase motif in bacteriophage T7 virions at the initiation of infection

1 reference

12 December 2020

Identifiers

DOI

10.1128/JB.05287-11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21804006%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21804006%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

PubMed publication ID

21804006

1 reference