Modeling the hydration layer around proteins: applications to small- and wide-angle x-ray scattering (Q35342345)

7 August 2017

title

Modeling the hydration layer around proteins: applications to small- and wide-angle x-ray scattering (English)

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X-ray scattering techniques

7 August 2017

main subject

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3

Tobin R Sosnick

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7 August 2017

4

Karl F Freed

1 reference

7 August 2017

author name string

Jouko Juhani Virtanen

series ordinal

1

1 reference

7 August 2017

Lee Makowski

series ordinal

2

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7 August 2017

language of work or name

English

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publication date

1 October 2011

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7 August 2017

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7 August 2017

volume

101

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7 August 2017

issue

8

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7 August 2017

page(s)

2061-2069

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

7 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3192974

Improved fitting of solution X-ray scattering data to macromolecular structures and structural ensembles by explicit water modeling

27 July 2018

1 reference

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Small-angle scattering for structural biology--expanding the frontier while avoiding the pitfalls.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3192974

Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS)

27 July 2018

1 reference

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A rapid coarse residue-based computational method for x-ray solution scattering characterization of protein folds and multiple conformational states of large protein complexes.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3192974

Simulated x-ray scattering of protein solutions using explicit-solvent models

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3192974

Integration of small-angle X-ray scattering data into structural modeling of proteins and their assemblies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3192974

Scalable molecular dynamics with NAMD

27 July 2018

1 reference

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Is the first hydration shell of lysozyme of higher density than bulk water?

27 July 2018

1 reference

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Changes in biomolecular conformation seen by small angle X-ray scattering

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3192974

Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing

27 July 2018

1 reference

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Protein hydration in solution: experimental observation by x-ray and neutron scattering

27 July 2018

1 reference

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Real-space refinement of the structure of hen egg-white lysozyme

27 July 2018

1 reference

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Comparative small-angle X-ray scattering studies on unacylated, acylated and cross-linked Escherichia coli transfer RNAIVal

27 July 2018

1 reference

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Small-angle x-ray scattering investigation of the solution structure of troponin C.

27 July 2018

1 reference

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Modeling the hydration layer around proteins: HyPred

27 July 2018

1 reference

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Characterization of protein fold by wide-angle X-ray solution scattering

26 September 2018

1 reference

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Molecular crowding inhibits intramolecular breathing motions in proteins.

26 September 2018

1 reference

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A myoglobin variant with a polar substitution in a conserved hydrophobic cluster in the heme binding pocket

26 September 2018

1 reference

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X-Ray diffuse scattering of globular protein solutions: Consideration of the solvent influence

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22004761

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Comparison of the three-dimensional structures of human, yeast, and oat ubiquitin

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22004761

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.BPJ.2011.09.021

1 reference

7 August 2017

1 reference

7 August 2017

1 reference