Design of gene circuits: lessons from bacteria (Q35621367)

9 August 2017

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title

Design of gene circuits: lessons from bacteria (English)

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9 August 2017

Michael E Wall

1

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9 August 2017

William S Hlavacek

series ordinal

2

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9 August 2017

Michael A Savageau

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3

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9 August 2017

language of work or name

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1 January 2004

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9 August 2017

Nature Reviews Genetics

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9 August 2017

5

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9 August 2017

1

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9 August 2017

34-42

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https://scigraph.springernature.com/pub.10.1038/nrg1244

9 August 2017

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cites work

Genetic regulatory mechanisms in the synthesis of proteins

2 references

31 March 2020

7 January 2021

1 reference

DNA microarray analysis of gene expression in response to physiological and genetic changes that affect tryptophan metabolism in Escherichia coli

31 March 2020

1 reference

Genomics of the marA/soxS/rob regulon of Escherichia coli: identification of directly activated promoters by application of molecular genetics and informatics to microarray data

31 March 2020

1 reference

Ordering genes in a flagella pathway by analysis of expression kinetics from living bacteria

31 March 2020

1 reference

Assigning numbers to the arrows: parameterizing a gene regulation network by using accurate expression kinetics

31 March 2020

1 reference

Genome-wide location and function of DNA binding proteins

31 March 2020

1 reference

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

31 March 2020

1 reference

Inferring genetic networks and identifying compound mode of action via expression profiling

31 March 2020

1 reference

Network motifs in the transcriptional regulation network of Escherichia coli

31 March 2020

1 reference

Construction of a genetic toggle switch in Escherichia coli

31 March 2020

1 reference

Engineered gene circuits.

31 March 2020

1 reference

A synthetic oscillatory network of transcriptional regulators

31 March 2020

1 reference

Development of genetic circuitry exhibiting toggle switch or oscillatory behavior in Escherichia coli

31 March 2020

1 reference

Prediction and measurement of an autoregulatory genetic module

31 March 2020

1 reference

Combinatorial synthesis of genetic networks

31 March 2020

1 reference

Directed evolution of a genetic circuit

31 March 2020

1 reference

Dual system to reinforce biological containment of recombinant bacteria designed for rhizoremediation

31 March 2020

1 reference

Improving lycopene production in Escherichia coli by engineering metabolic control

31 March 2020

1 reference

Re-engineering adenovirus regulatory pathways to enhance oncolytic specificity and efficacy

31 March 2020

1 reference

Subunit structure of regulator proteins influences the design of gene circuitry: analysis of perfectly coupled and completely uncoupled circuits.

31 March 2020

1 reference

Rules for coupled expression of regulator and effector genes in inducible circuits.

31 March 2020

1 reference

Completely uncoupled and perfectly coupled gene expression in repressible systems.

31 March 2020

1 reference

Design principles for regulator gene expression in a repressible gene circuit.

31 March 2020

1 reference

Genetic regulatory mechanisms and the ecological niche of Escherichia coli

31 March 2020

1 reference

trp repressor interactions with the trp aroH and trpR operators. Comparison of repressor binding in vitro and repression in vivo

31 March 2020

1 reference

Extending the method of mathematically controlled comparison to include numerical comparisons.

31 March 2020

1 reference

Comparison of repressor and transcriptional attenuator systems for control of amino acid biosynthetic operons

31 March 2020

1 reference

Organization and transcriptional regulation of the Escherichia coli K-12 D-serine tolerance locus

31 March 2020

1 reference

The Escherichia coli K-12 cyn operon is positively regulated by a member of the lysR family

31 March 2020

1 reference

A physiological role for cyanate-induced carbonic anhydrase in Escherichia coli

31 March 2020

1 reference

Functional analysis of the Escherichia coli K-12 cyn operon transcriptional regulation

31 March 2020

1 reference

Regulation of the metR gene of Salmonella typhimurium

31 March 2020

1 reference

Role of homocysteine in metR-mediated activation of the metE and metH genes in Salmonella typhimurium and Escherichia coli

31 March 2020

1 reference

Repression of the Escherichia coli modABCD (molybdate transport) operon by ModE

31 March 2020

1 reference

Design of molecular control mechanisms and the demand for gene expression

31 March 2020

1 reference

Alternative designs for a genetic switch: analysis of switching times using the piecewise power-law representation

31 March 2020

1 reference

Comparison of classical and autogenous systems of regulation in inducible operons

31 March 2020

1 reference

Significance of autogenously regulated and constitutive synthesis of regulatory proteins in repressible biosynthetic systems

31 March 2020

1 reference

Engineering stability in gene networks by autoregulation

31 March 2020

1 reference

Negative autoregulation speeds the response times of transcription networks

31 March 2020

1 reference

RegulonDB (version 3.2): transcriptional regulation and operon organization in Escherichia coli K-12

31 March 2020

1 reference

From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli.

31 March 2020

1 reference

Comprehensive studies of drug resistance mediated by overexpression of response regulators of two-component signal transduction systems in Escherichia coli

31 March 2020

1 reference

Autoactivation of the marRAB multiple antibiotic resistance operon by the MarA transcriptional activator in Escherichia coli

31 March 2020

1 reference

A regulatory cascade in the induction of rhaBAD.

31 March 2020

1 reference

Transcriptional regulation of the Escherichia coli rhaT gene

31 March 2020

1 reference

Organization and regulation of the D-xylose operons in Escherichia coli K-12: XylR acts as a transcriptional activator

31 March 2020

1 reference

Autogenous regulation of ethanolamine utilization by a transcriptional activator of the eut operon in Salmonella typhimurium

31 March 2020

1 reference

moaR, a gene that encodes a positive regulator of the monoamine regulon in Klebsiella aerogenes

31 March 2020

1 reference

Cobalamin-dependent 1,2-propanediol utilization by Salmonella typhimurium

31 March 2020

1 reference

A single regulatory gene integrates control of vitamin B12 synthesis and propanediol degradation

31 March 2020

1 reference

Two global regulatory systems (Crp and Arc) control the cobalamin/propanediol regulon of Salmonella typhimurium

31 March 2020

1 reference

Circadian clocks limited by noise

31 March 2020

1 reference

Detailed map of a cis-regulatory input function

31 March 2020

1 reference

THE PROPERTIES OF REPRESSOR AND THE KINETICS OF ITS ACTION

31 March 2020

1 reference

Parameter sensitivity as a criterion for evaluating and comparing the performance of biochemical systems.

31 March 2020

1 reference

Robustness in bacterial chemotaxis

31 March 2020

1 reference

Robustness of a gene regulatory circuit

31 March 2020

1 reference

Robustness of the BMP morphogen gradient in Drosophila embryonic patterning.

31 March 2020

1 reference

Distribution of minichromosomes in individual Escherichia coli cells: implications for replication control.

31 March 2020

1 reference

Noise in a minimal regulatory network: plasmid copy number control

31 March 2020

1 reference

Intrinsic noise in gene regulatory networks

31 March 2020

1 reference

Regulation of noise in the expression of a single gene

31 March 2020

1 reference

Intrinsic and extrinsic contributions to stochasticity in gene expression

31 March 2020

1 reference

Stochastic gene expression in a single cell

31 March 2020

1 reference

Noise in eukaryotic gene expression

31 March 2020

1 reference

Control, exploitation and tolerance of intracellular noise

31 March 2020

1 reference

Mechanisms of noise-resistance in genetic oscillators

31 March 2020

1 reference

Fifteen minutes of fim: control of type 1 pili expression in E. coli

31 March 2020

1 reference

Network motifs: simple building blocks of complex networks

31 March 2020

1 reference

Transcriptional regulatory networks in Saccharomyces cerevisiae

31 March 2020

1 reference

Regulation of the regulatory gene for the arabinose pathway, araC

31 March 2020

1 reference

Self-enhanced ligand degradation underlies robustness of morphogen gradients.

31 March 2020

1 reference

Response delays and the structure of transcription networks.

31 March 2020

1 reference

Positive Control of Enzyme Synthesis by Gene C in the l -Arabinose System

31 March 2020

1 reference

7 January 2021

Role of small molecules in regulation of D-serine deaminase synthesis

1 reference

7 January 2021

Induction of the ara operon of Escherichia coli B-r.

1 reference

7 January 2021

Identifiers

DOI

10.1038/NRG1244

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Dimensions Publication ID

9 August 2017

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