Testing gene-gene interactions in genome wide association studies (Q35805225)

10 August 2017

Testing gene-gene interactions in genome wide association studies (English)

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genome-wide association study

10 August 2017

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author name string

Jie Kate Hu

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1

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10 August 2017

Xianlong Wang

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2

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10 August 2017

Pei Wang

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3

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10 August 2017

15 January 2014

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10 August 2017

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10 August 2017

38

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10 August 2017

2

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10 August 2017

123-134

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Multivariate detection of gene-gene interactions

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Improved statistics for genome-wide interaction analysis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

EPIBLASTER-fast exhaustive two-locus epistasis detection strategy using graphical processing units

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

BOOST: A fast approach to detecting gene-gene interactions in genome-wide case-control studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Structures and Assumptions: Strategies to Harness Gene × Gene and Gene × Environment Interactions in GWAS.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Powerful SNP-set analysis for case-control genome-wide association studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

The pursuit of genome-wide association studies: where are we now?

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Screen and clean: a tool for identifying interactions in genome-wide association studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Bioinformatics challenges for genome-wide association studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

A gene-based method for detecting gene-gene co-association in a case-control association study

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Combining least absolute shrinkage and selection operator (LASSO) and principal-components analysis for detection of gene-gene interactions in genome-wide association studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Finding the missing heritability of complex diseases

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Detecting gene-gene interactions that underlie human diseases

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Common genetic variation and human traits

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Progress and challenges in genome-wide association studies in humans

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Estimation and testing for the effect of a genetic pathway on a disease outcome using logistic kernel machine regression via logistic mixed models

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

A HapMap harvest of insights into the genetics of common disease

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Genome-wide association studies for complex traits: consensus, uncertainty and challenges

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

The success of the genome-wide association approach: a brief story of a long struggle

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Biostatistical aspects of genome-wide association studies

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Backward genotype-trait association (BGTA)-based dissection of complex traits in case-control designs

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Test for interaction between two unlinked loci

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

A testing framework for identifying susceptibility genes in the presence of epistasis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Traversing the conceptual divide between biological and statistical epistasis: systems biology and a more modern synthesis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Genome-wide association studies: theoretical and practical concerns

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Tree and spline based association analysis of gene-gene interaction models for ischemic stroke

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Epistasis: what it means, what it doesn't mean, and statistical methods to detect it in humans

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

A single nucleotide polymorphism in the RAD51 gene modifies cancer risk in BRCA2 but not BRCA1 carriers

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Digenic retinitis pigmentosa due to mutations at the unlinked peripherin/RDS and ROM1 loci

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Linkage strategies for genetically complex traits. I. Multilocus models

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Two-locus models of disease

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

The Correlation between Relatives on the Supposition of Mendelian Inheritance

27 July 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

Genomewide association studies and human disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

Genome-wide association studies for common diseases and complex traits

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

Study designs for genome-wide association studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

Epistasis and its implications for personal genetics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

On the allelic spectrum of human disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

Common statistical issues in genome-wide association studies: a review on power, data quality control, genotype calling and population structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

A genotype-based approach to assessing the association between single nucleotide polymorphisms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

Composite measure of linkage disequilibrium for testing interaction between unlinked loci

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

SNPHarvester: a filtering-based approach for detecting epistatic interactions in genome-wide association studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

COE: a general approach for efficient genome-wide two-locus epistasis test in disease association study.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Predictive rule inference for epistatic interaction detection in genome-wide association studies.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

FastChi: an efficient algorithm for analyzing gene-gene interactions

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

A random forest approach to the detection of epistatic interactions in case-control studies

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Bayesian inference of epistatic interactions in case-control studies.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Genome-wide strategies for detecting multiple loci that influence complex diseases.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Case-only design to measure gene-gene interaction.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4487553

Case-Only Design to Measure Gene-Gene Interaction

25 September 2018

1 reference

https://api.crossref.org/works/10.1002%2FGEPI.21786

Testing association with interactions by partitioning chi-squares

21 January 2018

1 reference

12 December 2020

Genomewide association studies--illuminating biologic pathways

1 reference

12 December 2020

Genetic risk prediction--are we there yet?

1 reference

12 December 2020

Population genetics--making sense out of sequence

1 reference

12 December 2020

Identifying interacting SNPs using Monte Carlo logic regression

1 reference

12 December 2020

Identifiers

DOI

10.1002/GEPI.21786

1 reference

10 August 2017

1 reference

10 August 2017

PubMed publication ID

24431225

1 reference