antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters (Q35810231)

10 August 2017

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters (English)

1 reference

10 August 2017

Daniel Krug

4

0 references

Kai Blin

Kai Blin

2

0 references

Hyun Uk Kim

Hyun Uk Kim

5

0 references

Marnix H Medema

Marnix H Medema

13

0 references

Tilmann Weber

Tilmann Weber

1

0 references

Michael A. Fischbach

Michael A Fischbach

8

0 references

Eriko Takano

Eriko Takano

12

0 references

Rainer Breitling

Rainer Breitling

11

0 references

Rolf Müller

Rolf Müller

9

0 references

Sang Yup Lee

Sang Yup Lee

7

0 references

Robert E. Bruccoleri

6

Robert Bruccoleri

1 reference

10 August 2017

Srikanth Duddela

3

1 reference

PMCID

4489286

10 August 2017

Wolfgang Wohlleben

10

1 reference

PMCID

4489286

10 August 2017

language of work or name

English

0 references

publication date

6 May 2015

1 reference

10 August 2017

Nucleic Acids Research

1 reference

10 August 2017

43

1 reference

10 August 2017

W1

1 reference

10 August 2017

W237-43

1 reference

Creative Commons Attribution 4.0 International

10 August 2017

start time

11 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Metabolic engineering of antibiotic factories: new tools for antibiotic production in actinomycetes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Fast and sensitive protein alignment using DIAMOND

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

A roadmap for natural product discovery based on large-scale genomics and metabolomics

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

In silico tools for the analysis of antibiotic biosynthetic pathways

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Pfam: the protein families database

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

MS/MS networking guided analysis of molecule and gene cluster families.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

antiSMASH 2.0--a versatile platform for genome mining of secondary metabolite producers

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

BAGEL3: Automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

The RAVEN toolbox and its use for generating a genome-scale metabolic model for Penicillium chrysogenum

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

MultiMetEval: comparative and multi-objective analysis of genome-scale metabolic models

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

EFICAz2.5: application of a high-precision enzyme function predictor to 396 proteomes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Constraining the metabolic genotype-phenotype relationship using a phylogeny of in silico methods

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Natural products as sources of new drugs over the 30 years from 1981 to 2010

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

SMURF: Genomic mapping of fungal secondary metabolite clusters

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

SBSPKS: structure based sequence analysis of polyketide synthases

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

BLAST+: architecture and applications

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Automated genome mining for natural products.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Biopython: freely available Python tools for computational molecular biology and bioinformatics

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

A comparative genomics study of genetic products potentially encoding ladderane lipid biosynthesis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

ClustScan: an integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Structure and regulation of the omega-3 polyunsaturated fatty acid synthase genes from the deep-sea bacterium Photobacterium profundum strain SS9.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489286

Formation of 1,3-Cyclohexanediones and Resorcinols Catalyzed by a Widely Occuring Ketosynthase

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25948579

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKV437

1 reference

journals/nar/WeberBDKKBLFMWB15

10 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

10 August 2017

1 reference

PMCID

4489286