System-wide identification of wild-type SUMO-2 conjugation sites (Q35814214)

10 August 2017

System-wide identification of wild-type SUMO-2 conjugation sites (English)

1 reference

10 August 2017

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26073453%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

Rochelle C J D'Souza

2

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13 June 2020

Alfred Vertegaal

5

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13 June 2020

author name string

Jer-Gung Chang

3

1 reference

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13 June 2020

Matthias Mann

4

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13 June 2020

language of work or name

English

0 references

publication date

15 June 2015

1 reference

10 August 2017

Nature Communications

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13 June 2020

volume

6

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13 June 2020

page(s)

7289

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Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International

13 June 2020

copyright license

start time

15 June 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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SUMO2 is essential while SUMO3 is dispensable for mouse embryonic development

11 July 2018

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A COFRADIC protocol to study protein ubiquitination

11 July 2018

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Proteome-wide identification of SUMO2 modification sites

11 July 2018

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ProteomeXchange provides globally coordinated proteomics data submission and dissemination

11 July 2018

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Status of large-scale analysis of post-translational modifications by mass spectrometry

11 July 2018

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Immunoaffinity enrichment and mass spectrometry analysis of protein methylation

11 July 2018

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Sumoylation: a regulatory protein modification in health and disease

11 July 2018

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Detecting endogenous SUMO targets in mammalian cells and tissues

11 July 2018

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Regulation of DNA damage responses by ubiquitin and SUMO.

11 July 2018

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STRING v9.1: protein-protein interaction networks, with increased coverage and integration

11 July 2018

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1D and 2D annotation enrichment: a statistical method integrating quantitative proteomics with complementary high-throughput data

11 July 2018

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Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass

11 July 2018

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SUMO-specific protease 1 promotes prostate cancer progression and metastasis

11 July 2018

1 reference

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A SUMOylation-dependent transcriptional subprogram is required for Myc-driven tumorigenesis

11 July 2018

1 reference

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SUMOylation in carcinogenesis

11 July 2018

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PhosphoSitePlus: a comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse

11 July 2018

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Uncovering ubiquitin and ubiquitin-like signaling networks

11 July 2018

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Global identification of modular cullin-RING ligase substrates

11 July 2018

1 reference

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Systematic and quantitative assessment of the ubiquitin-modified proteome

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles

11 July 2018

1 reference

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A biotin switch-based proteomics approach identifies 14-3-3ζ as a target of Sirt1 in the metabolic regulation of caspase-2.

11 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Andromeda: a peptide search engine integrated into the MaxQuant environment

11 July 2018

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Purification and identification of endogenous polySUMO conjugates

11 July 2018

1 reference

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A tissue-specific atlas of mouse protein phosphorylation and expression

11 July 2018

1 reference

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A novel proteomics approach to identify SUMOylated proteins and their modification sites in human cells

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Site-specific identification of SUMO-2 targets in cells reveals an inverted SUMOylation motif and a hydrophobic cluster SUMOylation motif

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

SUMOylation and deSUMOylation at a glance

11 July 2018

1 reference

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Lysine acetylation targets protein complexes and co-regulates major cellular functions

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

System-wide changes to SUMO modifications in response to heat shock

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

RNF4 is a poly-SUMO-specific E3 ubiquitin ligase required for arsenic-induced PML degradation

11 July 2018

1 reference

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A SIM-ultaneous role for SUMO and ubiquitin

11 July 2018

1 reference

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Concepts in sumoylation: a decade on

11 July 2018

1 reference

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Mapping protein post-translational modifications with mass spectrometry

11 July 2018

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Conserved function of RNF4 family proteins in eukaryotes: targeting a ubiquitin ligase to SUMOylated proteins

11 July 2018

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Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips

11 July 2018

1 reference

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The Slx5-Slx8 complex affects sumoylation of DNA repair proteins and negatively regulates recombination

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Modification in reverse: the SUMO proteases

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Role of SUMO-interacting motif in Daxx SUMO modification, subnuclear localization, and repression of sumoylated transcription factors

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Distinct and overlapping sets of SUMO-1 and SUMO-2 target proteins revealed by quantitative proteomics

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

A system for efficient generation of adenovirus protein IX-producing helper cell lines

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Something about SUMO inhibits transcription

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

SUMO: a history of modification

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Cytoscape: a software environment for integrated models of biomolecular interaction networks

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Proteomic analysis of post-translational modifications

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Polymeric chains of SUMO-2 and SUMO-3 are conjugated to protein substrates by SAE1/SAE2 and Ubc9.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

SUMO-1 conjugation in vivo requires both a consensus modification motif and nuclear targeting

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Proteomics to study genes and genomes

11 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Gene ontology: tool for the unification of biology

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Functional heterogeneity of small ubiquitin-related protein modifiers SUMO-1 versus SUMO-2/3

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

A small ubiquitin-related polypeptide involved in targeting RanGAP1 to nuclear pore complex protein RanBP2

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Uncovering SUMOylation dynamics during cell-cycle progression reveals FoxM1 as a key mitotic SUMO target protein.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Up-regulation of SUMO1 pseudogene 3 (SUMO1P3) in gastric cancer and its clinical association.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

SUMO chains: polymeric signals

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

The ubiquitin-proteasome system is a key component of the SUMO-2/3 cycle

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Purification and activity assays for Ubc9, the ubiquitin-conjugating enzyme for the small ubiquitin-like modifier SUMO.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

The small ubiquitin-like modifier-1 (SUMO-1) consensus sequence mediates Ubc9 binding and is essential for SUMO-1 modification

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4490555

Improved visualization of protein consensus sequences by iceLogo

24 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS8289

Ubiquitin signalling in DNA replication and repair

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26073453

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The SUMO pathway is essential for nuclear integrity and chromosome segregation in mice

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26073453

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NCOMMS8289

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26073453%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26073453%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

PubMed publication ID

26073453

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26073453%20AND%20SRC:MED&resulttype=core&format=json