Metagenome-assembled genomes uncover a global brackish microbiome (Q35868780)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26667648%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

title

Metagenome-assembled genomes uncover a global brackish microbiome (English)

1 reference

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2 March 2020

0 references

5

1 reference

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2 March 2020

Anders F Andersson

7

1 reference

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2 March 2020

6

Jarone Pinhassi

1 reference

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2 March 2020

author name string

Luisa W Hugerth

1

1 reference

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2 March 2020

John Larsson

2

1 reference

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2 March 2020

Johannes Alneberg

3

1 reference

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2 March 2020

Markus V Lindh

4

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2 March 2020

publication date

14 December 2015

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2 March 2020

1 reference

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2 March 2020

volume

16

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2 March 2020

page(s)

279

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Creative Commons Attribution 4.0 International

2 March 2020

copyright license

start time

1 December 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

MUMmer

object named as

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Picocyanobacteria containing a novel pigment gene cluster dominate the brackish water Baltic Sea

11 July 2018

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Functional tradeoffs underpin salinity-driven divergence in microbial community composition

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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11 July 2018

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Hopanoids play a role in membrane integrity and pH homeostasis in Rhodopseudomonas palustris TIE-1

11 July 2018

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Virus population dynamics and acquired virus resistance in natural microbial communities

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The native bacterioplankton community in the central baltic sea is influenced by freshwater bacterial species

11 July 2018

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11 July 2018

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Staphylococcus aureus biofilm metabolism and the influence of arginine on polysaccharide intercellular adhesin synthesis, biofilm formation, and pathogenesis.

11 July 2018

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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

11 July 2018

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The bacterial species definition in the genomic era.

11 July 2018

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Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment

11 July 2018

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Polaribacter butkevichii sp. nov., a novel marine mesophilic bacterium of the family Flavobacteriaceae

11 July 2018

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Genome Streamlining in a Cosmopolitan Oceanic Bacterium

11 July 2018

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Environmental genome shotgun sequencing of the Sargasso Sea

11 July 2018

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Community structure and metabolism through reconstruction of microbial genomes from the environment

11 July 2018

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Versatile and open software for comparing large genomes

11 July 2018

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Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria

11 July 2018

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Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome

11 July 2018

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High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates

11 July 2018

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The ENZYME database in 2000

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

The COG database: a tool for genome-scale analysis of protein functions and evolution

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Nutrient uptake by microorganisms according to kinetic parameters from theory as related to cytoarchitecture

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Flow sorting of microorganisms for molecular analysis.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Key roles for freshwater Actinobacteria revealed by deep metagenomic sequencing

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Genome sequence of the oligotrophic marine Gammaproteobacterium HTCC2143, isolated from the Oregon Coast.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Pyrosequencing reveals contrasting seasonal dynamics of taxa within Baltic Sea bacterioplankton communities

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

217 000-year-old DNA sequences of green sulfur bacteria in Mediterranean sapropels and their implications for the reconstruction of the paleoenvironment

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Life on the margin: genetic isolation and diversity loss in a peripheral marine ecosystem, the Baltic Sea.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Disjunct distribution of highly diverged mitochondrial lineage clade and population subdivision in a marine bivalve with pelagic larval dispersal

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

Matrilinear phylogeography of Atlantic salmon (Salmo salar L.) in Europe and postglacial colonization of the Baltic Sea area.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4699468

CompostBin: A DNA Composition-Based Algorithm for Binning Environmental Shotgun Reads

24 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS13059-015-0834-7

Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS13059-015-0834-7

Ultrasome: efficient aberration caller for copy number studies of ultra-high resolution

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS13059-015-0834-7

10.1186/S13059-015-0834-7

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26667648%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

2 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26667648%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

PubMed publication ID

26667648

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26667648%20AND%20SRC:MED&resulttype=core&format=json