Further in vitro exploration fails to support the allosteric three-site model (Q35874323)

10 August 2017

Further in vitro exploration fails to support the allosteric three-site model (English)

1 reference

10 August 2017

Alexandros D Petropoulos

series ordinal

1

1 reference

10 August 2017

Rachel Green

series ordinal

2

1 reference

10 August 2017

language of work or name

English

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publication date

29 February 2012

1 reference

10 August 2017

7

1 reference

Journal of Biological Chemistry

inferred from page(s)

published in

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10 August 2017

287

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10 August 2017

15

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10 August 2017

11642-11648

1 reference

A primary role for release factor 3 in quality control during translation elongation in Escherichia coli

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Allosteric vs. spontaneous exit-site (E-site) tRNA dissociation early in protein synthesis

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Hyperaccurate and error-prone ribosomes exploit distinct mechanisms during tRNA selection

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Real-time tRNA transit on single translating ribosomes at codon resolution

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

A role for the 30S subunit E site in maintenance of the translational reading frame

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Quality control by the ribosome following peptide bond formation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Shine-Dalgarno interaction prevents incorporation of noncognate amino acids at the codon following the AUG

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Messenger RNA conformations in the ribosomal E site revealed by X-ray crystallography.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Genetic analysis of the E site during RF2 programmed frameshifting

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Structure of the 70S ribosome complexed with mRNA and tRNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

The interaction between C75 of tRNA and the A loop of the ribosome stimulates peptidyl transferase activity

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Crystal structure of the ribosome at 5.5 A resolution

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

The "allosteric three-site model" of elongation cannot be confirmed in a well-defined ribosome system from Escherichia coli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Mechanism of ribosomal translocation. tRNA binds transiently to an exit site before leaving the ribosome during translocation.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Intermediate states in the movement of transfer RNA in the ribosome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

The allosteric three-site model for the ribosomal elongation cycle. Analysis with a heteropolymeric mRNA.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Extension inhibition analysis of translation initiation complexes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Destabilization of codon-anticodon interaction in the ribosomal exit site

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Significance of the third tRNA binding site, the E site, on E. coli ribosomes for the accuracy of translation: an occupied E site prevents the binding of non-cognate aminoacyl-tRNA to the A site

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Nucleoside triphosphate regeneration decreases the frequency of translation errors

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3320913

Decoding errors and the involvement of the E-site

27 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.C111.330068

Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.C111.330068

Maintaining the ribosomal reading frame: the influence of the E site during translational regulation of release factor 2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.C111.330068

The active site of the ribosome is composed of two layers of conserved nucleotides with distinct roles in peptide bond formation and peptide release

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.C111.330068

The Ribosomal Elongation Cycle: tRNA Binding, Translocation and tRNA Release

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22378789

12 December 2020

inferred from PubMed ID database lookup

Mg2+/NH4+/polyamine system for polyuridine-dependent polyphenylalanine synthesis with near in vivo characteristics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22378789

12 December 2020

inferred from PubMed ID database lookup

Kinetic and thermodynamic parameters for tRNA binding to the ribosome and for the translocation reaction

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22378789

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1074/JBC.C111.330068

1 reference

10 August 2017

1 reference

10 August 2017

PubMed publication ID

22378789

1 reference