SCOPE: a web server for practical de novo motif discovery (Q35914127)

11 August 2017

SCOPE: a web server for practical de novo motif discovery (English)

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11 August 2017

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Jonathan M Carlson

1

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11 August 2017

Arijit Chakravarty

series ordinal

2

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11 August 2017

Charles E DeZiel

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3

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11 August 2017

Robert H Gross

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4

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11 August 2017

language of work or name

English

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publication date

7 May 2007

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11 August 2017

Nucleic Acids Research

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11 August 2017

35

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11 August 2017

Web Server issue

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11 August 2017

W259-64

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SPACER: identification of cis-regulatory elements with non-contiguous critical residues

11 August 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

Computational identification of transcriptional regulatory elements in DNA sequence

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

Bounded search for de novo identification of degenerate cis-regulatory elements

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

Practical strategies for discovering regulatory DNA sequence motifs

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

A survey of motif discovery methods in an integrated framework

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

Limitations and potentials of current motif discovery algorithms

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

Assessing computational tools for the discovery of transcription factor binding sites

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

WebLogo: A Sequence Logo Generator

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

Applied bioinformatics for the identification of regulatory elements

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

BEAM: a beam search algorithm for the identification of cis-regulatory elements in groups of genes.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933170

24 September 2018

Identifiers

DOI

10.1093/NAR/GKM310

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journals/nar/CarlsonCDG07

11 August 2017

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DBLP Dataset 2021-01-02

28 January 2021

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11 August 2017

PubMed publication ID

17485471

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