Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T)) (Q36011760)

11 August 2017

Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T)) (English)

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11 August 2017

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30

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11 August 2017

1

Alla Lapidus

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Evelyne-Marie Brambilla

21

Evelyne-Marie Brambilla

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Hans-Peter Klenk

31

Hans-Peter Klenk

0 references

Tijana Glavina Del Rio

4

Tijana Glavina Del Rio

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Roxanne Tapia

7

Roxanne Tapia

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Philip Hugenholtz

29

Philip Hugenholtz

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Tanja Woyke

32

Tanja Woyke

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Sam Pitluck

10

Sam Pitluck

1 reference

11 August 2017

28

Victor Markowitz

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11 August 2017

17

Amrita Pati

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11 August 2017

Jan-Fang Cheng

6

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Marcel Huntemann

14

Marcel Huntemann

1 reference

11 August 2017

Konstantinos Mavromatis

15

Konstantinos Mavromatis

1 reference

11 August 2017

9

Lynne Goodwin

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11 August 2017

16

Natalia Mikhailova

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11 August 2017

19

Krishna Palaniappan

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11 August 2017

2

Matt Nolan

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11 August 2017

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Amy Chen

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11 August 2017

3

Susan Lucas

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11 August 2017

5

Hope Tice

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11 August 2017

22

Manfred Rohde

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11 August 2017

12

Ioanna Pagani

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11 August 2017

23

Birte Abt

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11 August 2017

11

Konstantinos Liolios

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11 August 2017

8

Cliff Han

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11 August 2017

24

Susanne Verbarg

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11 August 2017

26

James Bristow

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11 August 2017

30 December 2011

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Standards in genomic sciences

11 August 2017

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11 August 2017

5

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11 August 2017

3

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11 August 2017

398-406

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The DNA bank network: the start from a german initiative

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

En route to a genome-based classification of Archaea and Bacteria?

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Prodigal: prokaryotic gene recognition and translation initiation site identification

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

IMG ER: a system for microbial genome annotation expert review and curation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

A rapid bootstrap algorithm for the RAxML Web servers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

The minimum information about a genome sequence (MIGS) specification

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

A Predator Unmasked: Life Cycle of Bdellovibrio bacteriovorus from a Genomic Perspective

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Characterization of filamentous Eikelboom type 021N bacteria and description of Thiothrix disciformis sp. nov. and Thiothrix flexilis sp. nov.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Multiple sequence alignment using partial order graphs

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Bacterial gliding motility: multiple mechanisms for cell movement over surfaces.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Gene ontology: tool for the unification of biology

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewater-treatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii sp. nov., Thiothrix fructosivora

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Cloning and characterization of the Flavobacterium johnsoniae (Cytophaga johnsonae) gliding motility gene, gldA

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Mechanism of attachment of swarm cells of Thiothrix nivea

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Basic local alignment search tool

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

Characterization of Thiothrix nivea

2 October 2017

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2344929

Approved Lists of Bacterial Names

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2344929

Validation List no. 106: Validation of publication of new names and new combinations previously effectively published outside the IJSEM

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2344929

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.4056%2FSIGS.2344929

How many bootstrap replicates are necessary?

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3368414

23 September 2018

Identifiers

DOI

10.4056/SIGS.2344929

1 reference

Dimensions Publication ID

11 August 2017

0 references

1 reference

11 August 2017

PubMed publication ID

22675589

1 reference