Light-triggered beta-hairpin folding and unfolding (Q36012489)

11 August 2017

Light-triggered beta-hairpin folding and unfolding (English)

1 reference

11 August 2017

Tobias E Schrader

1

1 reference

11 August 2017

Wolfgang J Schreier

2

1 reference

11 August 2017

Thorben Cordes

3

1 reference

11 August 2017

Florian O Koller

4

1 reference

11 August 2017

Galina Babitzki

5

1 reference

11 August 2017

Robert Denschlag

6

1 reference

11 August 2017

Christian Renner

7

1 reference

11 August 2017

Markus Löweneck

8

1 reference

11 August 2017

Shou-Liang Dong

9

1 reference

11 August 2017

Luis Moroder

10

1 reference

11 August 2017

Paul Tavan

11

1 reference

11 August 2017

Wolfgang Zinth

12

1 reference

11 August 2017

language of work or name

English

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publication date

24 September 2007

1 reference

Proceedings of the National Academy of Sciences of the United States of America

11 August 2017

1 reference

11 August 2017

104

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11 August 2017

40

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11 August 2017

15729-15734

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

11 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Model systems for beta-hairpins and beta-sheets

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Simulation protocols for coherent femtosecond vibrational spectra of peptides

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

A photocontrolled beta-hairpin peptide.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Replica exchange with solute tempering: a method for sampling biological systems in explicit water

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Alpha-helix formation in a photoswitchable peptide tracked from picoseconds to microseconds by time-resolved IR spectroscopy.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Applications of model beta-hairpin peptides

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Ultrafast conformational dynamics in cyclic azobenzene peptides of increased flexibility.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Trp zipper folding kinetics by molecular dynamics and temperature-jump spectroscopy.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

The kinetics of helix unfolding of an azobenzene cross-linked peptide probed by nanosecond time-resolved optical rotatory dispersion.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Picosecond conformational transition and equilibration of a cyclic peptide

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

What vibrations tell us about proteins.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Ultrafast spectroscopy reveals subnanosecond peptide conformational dynamics and validates molecular dynamics simulation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Understanding beta-hairpin formation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Folding dynamics and mechanism of beta-hairpin formation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Vibrational spectroscopy and conformation of peptides, polypeptides, and proteins

2 October 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

2 October 2017

https://api.crossref.org/works/10.1073%2FPNAS.0707322104

Tertiary contact formation in alpha-synuclein probed by electron transfer.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

A new tool in peptide engineering: a photoswitchable stilbene-type beta-hairpin mimetic.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

A photoinducible beta-hairpin.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Detection-dependent kinetics as a probe of folding landscape microstructure

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Heterogeneous folding of the trpzip hairpin: full atom simulation and experiment

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

Dynamics of unfolded polypeptide chains as model for the earliest steps in protein folding.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1993841

A fast SHAKE algorithm to solve distance constraint equations for small molecules in molecular dynamics simulations

23 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0707322104

Molecular dynamics with coupling to an external bath

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0707322104

Residual Native Structure in a Thermally Denatured β-Hairpin

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0707322104

Vibrational spectra from atomic fluctuations in dynamics simulations. II. Solvent-induced frequency fluctuations at femtosecond time resolution

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17893334

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Fast events in protein folding: the time evolution of primary processes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17893334

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Vibrational spectra from atomic fluctuations in dynamics simulations. I. Theory, limitations, and a sample application

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17893334

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0707322104

1 reference

11 August 2017

0 references

1 reference

11 August 2017

PubMed publication ID

17893334

1 reference