Mining plant genome browsers as a means for efficient connection of physical, genetic and cytogenetic mapping: An example using soybean. (Q36085146)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

title

Mining plant genome browsers as a means for efficient connection of physical, genetic and cytogenetic mapping: An example using soybean (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

author

Ana Maria Benko-Iseppon

7

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

https://orcid.org/0000-0002-0575-3197

Ricardo V Abdelnoor

6

object named as

Ricardo V Abdelnoor

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

Ana Christina Brasileiro-Vidal

8 February 2020

3

object named as

Ana C Brasileiro-Vidal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Luis Carlos Belarmino

1

object named as

Luis C Belarmino

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

author name string

Ana R da S Oliveira

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Kyria C de A Bortoleti

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

João Pacífico Bezerra-Neto

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

publication date

1 June 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

Genetics and Molecular Biology

8 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

volume

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

issue

1 (suppl)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

page(s)

335-347

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula

8 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Gramene database in 2010: updates and extensions

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Comparative genome analysis of PHB gene family reveals deep evolutionary origins and diverse gene function

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Choosing a genome browser for a Model Organism Database: surveying the maize community.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Cytogenetic map of common bean (Phaseolus vulgaris L.).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

A fluorescence in situ hybridization system for karyotyping soybean

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Chromosomal detection of simple sequence repeats (SSRs) using nondenaturing FISH (ND-FISH).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Synteny mapping between common bean and soybean reveals extensive blocks of shared loci

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Genome sequence of the palaeopolyploid soybean

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Physical mapping of wheat aquaporin genes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Comparative molecular cytogenetics of major repetitive sequence families of three Dendrobium species (Orchidaceae) from Bangladesh

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Divergence in function and expression of the NOD26-like intrinsic proteins in plants

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Chromosomal phylogeny and karyotype evolution in x=7 crucifer species (Brassicaceae).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Legume anchor markers link syntenic regions between Phaseolus vulgaris, Lotus japonicus, Medicago truncatula and Arachis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

PlantGDB: a resource for comparative plant genomics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Aquaporin structure-function relationships: water flow through plant living cells

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

ER membrane aquaporins in plants

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

A comparative map viewer integrating genetic maps for Brassica and Arabidopsis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

A soybean transcript map: gene distribution, haplotype and single-nucleotide polymorphism analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

MIPSPlantsDB--plant database resource for integrative and comparative plant genome research

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Functional aquaporin diversity in plants

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Paleopolyploidy and gene duplication in soybean and other legumes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

The Soybean Genome Database (SoyGD): a browser for display of duplicated, polyploid, regions and sequence tagged sites on the integrated physical and genetic maps of Glycine max.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Regulation of plant aquaporin activity.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Estimating genome conservation between crop and model legume species

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

A new integrated genetic linkage map of the soybean

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

The complete set of genes encoding major intrinsic proteins in Arabidopsis provides a framework for a new nomenclature for major intrinsic proteins in plants

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Aquaporins constitute a large and highly divergent protein family in maize

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

A nomadic subtelomeric disease resistance gene cluster in common bean.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

High-resolution pachytene chromosome mapping of bacterial artificial chromosomes anchored by genetic markers reveals the centromere location and the distribution of genetic recombination along chromosome 10 of rice.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Ribosomal transcription units integrated via T-DNA transformation associate with the nucleolus and do not require upstream repeat sequences for activity in Arabidopsis thaliana

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3392886

Novel type aquaporin SIPs are mainly localized to the ER membrane and show cell-specific expression in Arabidopsis thaliana

11 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1590%2FS1415-47572012000200015

Independent ancient polyploidy events in the sister families Brassicaceae and Cleomaceae.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1590%2FS1415-47572012000200015

Cytogenetic mapping of common bean chromosomes reveals a less compartmentalized small-genome plant species

21 January 2018

1 reference

12 December 2020

An integrated map of Oryza sativa L. chromosome 5

1 reference

12 December 2020

The nonrandom distribution of long clusters of all possible classes of trinucleotide repeats in barley chromosomes

1 reference

12 December 2020

Integration of common bean ( Phaseolus vulgaris L.) linkage and chromosomal maps

1 reference

12 December 2020

Significant microsynteny with new evolutionary highlights is detected between Arabidopsis and legume model plants despite the lack of macrosynteny

1 reference

12 December 2020

Identification of 33 rice aquaporin genes and analysis of their expression and function

1 reference

12 December 2020

An air drying technique for maize chromosomes without enzymatic maceration

1 reference

12 December 2020

10.1590/S1415-47572012000200015

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

release_wlvvwnmi3bbutpc3fhnzvs4ke4

8 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/wlvvwnmi3bbutpc3fhnzvs4ke4

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22802719%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

PubMed publication ID

22802719

1 reference