Transmembrane helix: simple or complex (Q36088352)

12 August 2017

Transmembrane helix: simple or complex (English)

1 reference

12 August 2017

transmembrane protein

0 references

author

Sebastian Maurer-Stroh

object named as

Sebastian Maurer-Stroh

series ordinal

2

0 references

Frank Eisenhaber

series ordinal

4

object named as

Frank Eisenhaber

1 reference

12 August 2017

Wing-Cheong Wong

1

1 reference

PMCID

3394259

12 August 2017

Georg Schneider

series ordinal

3

1 reference

PMCID

3394259

12 August 2017

language of work or name

English

0 references

publication date

7 May 2012

1 reference

12 August 2017

Nucleic Acids Research

1 reference

12 August 2017

40

1 reference

12 August 2017

Web Server issue

1 reference

12 August 2017

W370-5

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

12 August 2017

start time

5 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Not all transmembrane helices are born equal: Towards the extension of the sequence homology concept to membrane proteins

1 reference

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The Janus-faced E-values of HMMER2: extreme value distribution or logistic function?

2 October 2017

1 reference

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More than 1,001 problems with protein domain databases: transmembrane regions, signal peptides and the issue of sequence homology

2 October 2017

1 reference

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A probabilistic model of local sequence alignment that simplifies statistical significance estimation

2 October 2017

1 reference

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Crystal structure of squid rhodopsin

2 October 2017

1 reference

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Crystal Structure of Squid Rhodopsin with Intracellularly Extended Cytoplasmic Region

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Data growth and its impact on the SCOP database: new developments

2 October 2017

1 reference

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Advantages of combined transmembrane topology and signal peptide prediction--the Phobius web server

2 October 2017

1 reference

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Structure of bovine rhodopsin in a trigonal crystal form.

2 October 2017

1 reference

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What is a hidden Markov model?

2 October 2017

1 reference

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Location and nature of the residues important for ligand recognition in G-protein coupled receptors

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

A combined transmembrane topology and signal peptide prediction method

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Rhodopsin crystal: new template yielding realistic models of G-protein-coupled receptors?

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

On filtering false positive transmembrane protein predictions

2 October 2017

1 reference

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Evolution of function in protein superfamilies, from a structural perspective.

2 October 2017

1 reference

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Membrane protein folding and stability: physical principles

2 October 2017

1 reference

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A hidden Markov model for predicting transmembrane helices in protein sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Principles governing amino acid composition of integral membrane proteins: application to topology prediction

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Analysis of compositionally biased regions in sequence databases

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Convergent evolution: the need to be explicit

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

SCOP: a structural classification of proteins database for the investigation of sequences and structures

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

A preliminary three-dimensional structure of angiogenin

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Database of homology-derived protein structures and the structural meaning of sequence alignment

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Methods and algorithms for statistical analysis of protein sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Applying motif and profile searches

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

"Homology" in proteins and nucleic acids: a terminology muddle and a way out of it.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Similar amino acid sequences revisited

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Modeled structure of a G-protein-coupled receptor: the cholecystokinin-1 receptor

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Convergent evolution of domain architectures (is rare).

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

TM or not TM: transmembrane protein prediction with low false positive rate using DAS-TMfilter.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Structural and functional role of helices I and II in rhodopsin. A novel interplay evidenced by mutations at Gly-51 and Gly-89 in the transmembrane domain

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Hydrophobic interactions of peptides with membrane interfaces.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

A comparison of the predicted and X-ray structures of angiogenin. Implications for further studies of model building of homologous proteins.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3394259

Movement of retinal along the visual transduction path

23 September 2018

1 reference

12 December 2020

Practical limits of function prediction

1 reference

12 December 2020

Amino-Acid Sequence Investigations of Fibrinopeptides from Various Mammals: Evolutionary Implications

1 reference

12 December 2020

Construction of phylogenetic trees

1 reference

12 December 2020

Computer analysis of protein evolution / Margaret O. Dayhoff. - (7.1969)

1 reference

12 December 2020

Comparison of the Amino Acid Sequence of Bovine α-Lactalbumin and Hens Egg White Lysozyme

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKS379

1 reference

12 August 2017

journals/nar/WongM0E12

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

12 August 2017

1 reference

PMCID

3394259