SHIVA - a web application for drug resistance and tropism testing in HIV. (Q36109547)

12 August 2017

SHIVA - a web application for drug resistance and tropism testing in HIV. (English)

1 reference

12 August 2017

1 reference

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27549230%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

2

Thomas Hummel

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27549230%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

author name string

Mona Riemenschneider

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27549230%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

publication date

22 August 2016

1 reference

12 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27549230%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

volume

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27549230%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

issue

1

1 reference

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13 June 2020

page(s)

314

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27549230%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/s12859-016-1179-2

13 June 2020

exact match

0 references

cites work

2015 Update of the Drug Resistance Mutations in HIV-1.

1 reference

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gCUP: rapid GPU-based HIV-1 co-receptor usage prediction for next-generation sequencing

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Multilabel classification for exploiting cross-resistance information in HIV-1 drug resistance prediction

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Improved Bevirimat resistance prediction by combination of structural and sequence-based classifiers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Analysis of quality raw data of second generation sequencers with Quality Assessment Software

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Machine learning on normalized protein sequences.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Structure of HIV-1 quasi-species as early indicator for switches of co-receptor tropism.

2 October 2017

1 reference

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Prediction of co-receptor usage of HIV-1 from genotype

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Predicting Bevirimat resistance of HIV-1 from genotype

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

BioJava: an open-source framework for bioinformatics

2 October 2017

1 reference

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Maturation inhibitors: a new therapeutic class targets the virus structure

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Web resources for HIV type 1 genotypic-resistance test interpretation

2 October 2017

1 reference

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Maraviroc (UK-427,857), a potent, orally bioavailable, and selective small-molecule inhibitor of chemokine receptor CCR5 with broad-spectrum anti-human immunodeficiency virus type 1 activity

2 October 2017

1 reference

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Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Diversity and complexity of HIV-1 drug resistance: a bioinformatics approach to predicting phenotype from genotype

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Identification of a major co-receptor for primary isolates of HIV-1

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

A simple method for displaying the hydropathic character of a protein

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

A simple structure-based model for the prediction of HIV-1 co-receptor tropism

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Interpol: An R package for preprocessing of protein sequences

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4994198

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

2 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12859-016-1179-2

Bioinformatics prediction of HIV coreceptor usage

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27549230

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12859-016-1179-2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27549230%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcbi/Riemenschneider16

13 June 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27549230%20AND%20SRC:MED&resulttype=core&format=json

13 June 2020

1 reference