Microarray-based characterization of the Listeria monocytogenes cold regulon in log- and stationary-phase cells (Q36137182)

12 August 2017

Microarray-based characterization of the Listeria monocytogenes cold regulon in log- and stationary-phase cells (English)

1 reference

12 August 2017

Listeria monocytogenes

0 references

author

Martin Wiedmann

series ordinal

4

1 reference

12 August 2017

Kathryn J Boor

3

0 references

author name string

Yvonne C Chan

series ordinal

1

1 reference

12 August 2017

Sarita Raengpradub

series ordinal

2

1 reference

12 August 2017

language of work or name

English

0 references

publication date

24 August 2007

1 reference

Applied and Environmental Microbiology

12 August 2017

1 reference

12 August 2017

73

1 reference

12 August 2017

20

1 reference

12 August 2017

6484-6498

1 reference

describes a project that uses

12 August 2017

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/2075049

inferred from PubMed Central ID database lookup

cites work

SigmaB-dependent and sigmaB-independent mechanisms contribute to transcription of Listeria monocytogenes cold stress genes during cold shock and cold growth

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Temperature-dependent expression of Listeria monocytogenes internalin and internalin-like genes suggests functional diversity of these proteins among the listeriae

2 October 2017

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Characterization of relA and codY mutants of Listeria monocytogenes: identification of the CodY regulon and its role in virulence

2 October 2017

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Mutational analysis of the Escherichia coli DEAD box protein CsdA

2 October 2017

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Characterization of the Staphylococcus aureus heat shock, cold shock, stringent, and SOS responses and their effects on log-phase mRNA turnover

2 October 2017

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Contribution of penicillin-binding protein homologs to antibiotic resistance, cell morphology, and virulence of Listeria monocytogenes EGDe.

2 October 2017

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A cold-sensitive Listeria monocytogenes mutant has a transposon insertion in a gene encoding a putative membrane protein and shows altered (p)ppGpp levels

2 October 2017

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Global transcriptome analysis of the cold shock response of Shewanella oneidensis MR-1 and mutational analysis of its classical cold shock proteins

2 October 2017

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Characterization of the bifunctional glycosyltransferase/acyltransferase penicillin-binding protein 4 of Listeria monocytogenes

2 October 2017

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Cold-induced putative DEAD box RNA helicases CshA and CshB are essential for cold adaptation and interact with cold shock protein B in Bacillus subtilis

2 October 2017

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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

2 October 2017

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Achieving continuous improvement in reductions in foodborne listeriosis--a risk-based approach

2 October 2017

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Prediction of transcriptional terminators in Bacillus subtilis and related species

2 October 2017

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Construction and characterization of Listeria monocytogenes mutants with in-frame deletions in the response regulator genes identified in the genome sequence

2 October 2017

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CodY, a global regulator of stationary phase and virulence in Gram-positive bacteria

2 October 2017

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NCBI GEO: mining millions of expression profiles--database and tools

2 October 2017

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Genome-wide transcriptional analysis of the cold shock response in wild-type and cold-sensitive, quadruple-csp-deletion strains of Escherichia coli

2 October 2017

1 reference

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Functional and structural analysis of HrcA repressor protein from Caulobacter crescentus

2 October 2017

1 reference

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Bioconductor: open software development for computational biology and bioinformatics

2 October 2017

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RsbT and RsbV contribute to sigmaB-dependent survival under environmental, energy, and intracellular stress conditions in Listeria monocytogenes

2 October 2017

1 reference

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Listeria monocytogenes regulates flagellar motility gene expression through MogR, a transcriptional repressor required for virulence

2 October 2017

1 reference

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Disruption of putative regulatory loci in Listeria monocytogenes demonstrates a significant role for Fur and PerR in virulence

2 October 2017

1 reference

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Role of the glycine betaine and carnitine transporters in adaptation of Listeria monocytogenes to chill stress in defined medium

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Normalization of cDNA microarray data

2 October 2017

1 reference

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Listeria monocytogenes sigma B regulates stress response and virulence functions

2 October 2017

1 reference

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Chill induction of the SigB-dependent general stress response in Bacillus subtilis and its contribution to low-temperature adaptation

2 October 2017

1 reference

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Pathogen, host and environmental factors contributing to the pathogenesis of listeriosis

2 October 2017

1 reference

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Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis

2 October 2017

1 reference

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Genomewide transcriptional analysis of the cold shock response in Bacillus subtilis

2 October 2017

1 reference

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An RNA thermosensor controls expression of virulence genes in Listeria monocytogenes

2 October 2017

1 reference

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The LisRK signal transduction system determines the sensitivity of Listeria monocytogenes to nisin and cephalosporins

2 October 2017

1 reference

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Variation of branched-chain fatty acids marks the normal physiological range for growth in Listeria monocytogenes.

2 October 2017

1 reference

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Identification of Listeria monocytogenes genes expressed in response to growth at low temperature

2 October 2017

1 reference

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Listeria monocytogenes relA and hpt mutants are impaired in surface-attached growth and virulence

2 October 2017

1 reference

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Development and evaluation of functional gene arrays for detection of selected genes in the environment

2 October 2017

1 reference

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Global transcriptional response of Bacillus subtilis to heat shock

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Lysergic acid diethylamide- and mescaline-induced attenuation of the effect of punishment in the rat

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Characterization of the groESL operon in Listeria monocytogenes: utilization of two reporter systems (gfp and hly) for evaluating in vivo expression.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Role of sigma(B) in adaptation of Listeria monocytogenes to growth at low temperature

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

OppA of Listeria monocytogenes, an oligopeptide-binding protein required for bacterial growth at low temperature and involved in intracellular survival

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Osmotic and chill activation of glycine betaine porter II in Listeria monocytogenes membrane vesicles

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

PrfA, the transcriptional activator of virulence genes, is upregulated during interaction of Listeria monocytogenes with mammalian cells and in eukaryotic cell extracts

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Expression of the sigmaB-dependent general stress regulon confers multiple stress resistance in Bacillus subtilis.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

A two-component signal transduction system essential for growth of Bacillus subtilis: implications for anti-infective therapy.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

The CspA family in Escherichia coli: multiple gene duplication for stress adaptation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

The complete genome sequence of the gram-positive bacterium Bacillus subtilis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Critical role of anteiso-C15:0 fatty acid in the growth of Listeria monocytogenes at low temperatures

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

The complete genome sequence of Escherichia coli K-12

2 October 2017

1 reference

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Ribotypes and virulence gene polymorphisms suggest three distinct Listeria monocytogenes lineages with differences in pathogenic potential

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Trigger factor is induced upon cold shock and enhances viability of Escherichia coli at low temperatures

2 October 2017

1 reference

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Identification, cloning, and characterization of the Ima operon, whose gene products are unique to Listeria monocytogenes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Cold stress proteins induced in Listeria monocytogenes in response to temperature downshock and growth at low temperatures

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Heat-shock and general stress response in Bacillus subtilis.

2 October 2017

1 reference

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Cold shock stress-induced proteins in Bacillus subtilis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Cold shock and cold acclimation proteins in the psychrotrophic bacterium Arthrobacter globiformis SI55.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Genetics of pentose-phosphate pathway enzymes of Escherichia coli K-12.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Glycine betaine confers enhanced osmotolerance and cryotolerance on Listeria monocytogenes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

The cold-shock response--a hot topic

2 October 2017

1 reference

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Effect of growth temperatures on the protein levels in a psychrotrophic bacterium, Pseudomonas fragi

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Listeria monocytogenes can grow in macrophages without the aid of proteins induced by environmental stresses

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Expression of the Listeria monocytogenes EGD inlA and inlB genes, whose products mediate bacterial entry into tissue culture cell lines, by PrfA-dependent and -independent mechanisms

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Induction of proteins in response to low temperature in Escherichia coli

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Identification of a gene that positively regulates expression of listeriolysin, the major virulence factor of listeria monocytogenes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Cold adaptation of microorganisms

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

The expression of virulence genes in Listeria monocytogenes is thermoregulated

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Cloning and characterization of a gene encoding flagellin of Listeria monocytogenes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

DNA microarray analysis of the heat- and cold-shock stimulons in Yersinia pestis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Evidence that the essential response regulator YycF in Streptococcus pneumoniae modulates expression of fatty acid biosynthesis genes and alters membrane composition

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

The main cold shock protein of Listeria monocytogenes belongs to the family of ferritin-like proteins

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

A family of cold shock proteins in Bacillus subtilis is essential for cellular growth and for efficient protein synthesis at optimal and low temperatures.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Sigma L is important for cold shock adaptation of Bacillus subtilis

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Precursor and temperature modulation of fatty acid composition and growth of Listeria monocytogenes cold-sensitive mutants with transposon-interrupted branched-chain alpha-keto acid dehydrogenase

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Cell wall modifications during osmotic stress in Lactobacillus casei.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

sigmaB-dependent gene induction and expression in Listeria monocytogenes during osmotic and acid stress conditions simulating the intestinal environment

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

In vitro transcription of the Listeria monocytogenes virulence genes inlC and mpl reveals overlapping PrfA-dependent and -independent promoters that are differentially activated by GTP.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Influence of the sigB gene on the cold stress survival and subsequent recovery of two Listeria monocytogenes serotypes.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Changes in Escherichia coli transcriptome during acclimatization at low temperature.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Transcriptome analysis of Listeria monocytogenes identifies three groups of genes differently regulated by PrfA.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Genome-wide transcriptional profiling of the Bacillus subtilis cold-shock response

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Listeria monocytogenes bile salt hydrolase is a PrfA-regulated virulence factor involved in the intestinal and hepatic phases of listeriosis

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

BipA is required for growth of Escherichia coi K12 at low temperature

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Listeria monocytogenes response regulators important for stress tolerance and pathogenesis.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Electron paramagnetic resonance studies of the membrane fluidity of the foodborne pathogenic psychrotroph Listeria monocytogenes.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Cyclophilin and trigger factor from Bacillus subtilis catalyze in vitro protein folding and are necessary for viability under starvation conditions.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

CspA, the major cold-shock protein of Escherichia coli, is an RNA chaperone.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Transposon-induced mutants of Listeria monocytogenes incapable of growth at low temperature (4 degrees C).

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

Contributions of Listeria monocytogenes B and PrfA to expression of virulence and stress response genes during extra- and intracellular growth

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

The Listeria monocytogenes prfAP2 promoter is regulated by sigma B in a growth phase dependent manner

5 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2075049

PrfA mediates specific binding of RNA polymerase of Listeria monocytogenes to PrfA-dependent virulence gene promoters resulting in a transcriptionally active complex

5 December 2018

1 reference

12 December 2020

Minimum growth temperatures of Listeria monocytogenes and non-haemolytic Listeria

1 reference

12 December 2020

Temperature-dependent expression of flagella of Listeria monocytogenes studied by electron microscopy, SDS-PAGE and western blotting

1 reference

12 December 2020

Adaptation of Bacillus subtilis to growth at low temperature: a combined transcriptomic and proteomic appraisal

1 reference

12 December 2020

DNA supercoiling and thermal regulation of unsaturated fatty acid synthesis in Bacillus subtilis

1 reference

12 December 2020

Analysis of heat and cold shock proteins in Listeria by two-dimensional electrophoresis

1 reference

12 December 2020

Regulation of the expression of the cold shock proteins CspB and CspC in Bacillus subtilis

1 reference

12 December 2020

Adoptive transfer of immunity to Listeria monocytogenes. The influence of in vitro stimulation on lymphocyte subset requirements

1 reference

12 December 2020

Identifiers

DOI

10.1128/AEM.00897-07

1 reference

12 August 2017

1 reference

12 August 2017

1 reference