In-Depth Assessment of Within-Individual and Inter-Individual Variation in the B Cell Receptor Repertoire (Q36147360)

12 August 2017

In-Depth Assessment of Within-Individual and Inter-Individual Variation in the B Cell Receptor Repertoire (English)

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12 August 2017

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12 August 2017

Jacob D Galson

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Johannes Trück

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Johannes Trück

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Vincenzo Cerundolo

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Vincenzo Cerundolo

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12 August 2017

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Andrew J Pollard

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12 August 2017

Anna Fowler

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12 August 2017

Márton Münz

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12 August 2017

Dominic F Kelly

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12 August 2017

12 October 2015

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12 August 2017

Frontiers in Immunology

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12 August 2017

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12 August 2017

531

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describes a project that uses

12 August 2017

ggplot2

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ggplot2

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10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=4601265

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Estimating T-cell repertoire diversity: limitations of classical estimators and a new approach

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Diversification of memory B cells drives the continuous adaptation of secretory antibodies to gut microbiota.

2 October 2017

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A bioinformatic framework for immune repertoire diversity profiling enables detection of immunological status

2 October 2017

1 reference

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BCR repertoire sequencing: different patterns of B-cell activation after two Meningococcal vaccines

2 October 2017

1 reference

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Timely and spatially regulated maturation of B and T cell repertoire during human fetal development

2 October 2017

1 reference

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Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles

2 October 2017

1 reference

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B-cell repertoire responses to varicella-zoster vaccination in human identical twins

2 October 2017

1 reference

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Identification of antigen-specific B cell receptor sequences using public repertoire analysis

2 October 2017

1 reference

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Quantitative assessment of the robustness of next-generation sequencing of antibody variable gene repertoires from immunized mice

2 October 2017

1 reference

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Capturing needles in haystacks: a comparison of B-cell receptor sequencing methods.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Immunoglobulin class-switched B cells form an active immune axis between CNS and periphery in multiple sclerosis.

2 October 2017

1 reference

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Impact of next-generation sequencing error on analysis of barcoded plasmid libraries of known complexity and sequence.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Human responses to influenza vaccination show seroconversion signatures and convergent antibody rearrangements

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Studying the antibody repertoire after vaccination: practical applications.

2 October 2017

1 reference

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Differences in the composition of the human antibody repertoire by B cell subsets in the blood

2 October 2017

1 reference

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Two types of antibodies are induced by vaccination with A/California/2009 pdm virus: binding near the sialic acid-binding pocket and neutralizing both H1N1 and H5N1 viruses.

2 October 2017

1 reference

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Effects of aging, cytomegalovirus infection, and EBV infection on human B cell repertoires

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Human lymphocyte repertoires in ageing

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Genetic measurement of memory B-cell recall using antibody repertoire sequencing

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Convergent antibody signatures in human dengue

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Minimal residual disease quantification using consensus primers and high-throughput IGH sequencing predicts post-transplant relapse in chronic lymphocytic leukemia.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Lineage structure of the human antibody repertoire in response to influenza vaccination

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

High-throughput sequencing of the paired human immunoglobulin heavy and light chain repertoire.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Pandemic H1N1 Influenza Infection and Vaccination in Humans Induces Cross-Protective Antibodies that Target the Hemagglutinin Stem

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Protective Roles of Natural IgM Antibodies

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Human monoclonal antibodies to pandemic 1957 H2N2 and pandemic 1968 H3N2 influenza viruses

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Antibody V(h) repertoire differences between resolving and chronically evolving hepatitis C virus infections

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

High-resolution description of antibody heavy-chain repertoires in humans

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Monoclonal antibodies isolated without screening by analyzing the variable-gene repertoire of plasma cells

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

High-throughput immunoglobulin repertoire analysis distinguishes between human IgM memory and switched memory B-cell populations

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Measurement and clinical monitoring of human lymphocyte clonality by massively parallel VDJ pyrosequencing

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Precise determination of the diversity of a combinatorial antibody library gives insight into the human immunoglobulin repertoire

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Circos: an information aesthetic for comparative genomics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

IMGT/V-QUEST: the highly customized and integrated system for IG and TR standardized V-J and V-D-J sequence analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Age-associated differences in immunoglobulin G1 (IgG1) and IgG2 subclass antibodies to pneumococcal polysaccharides following vaccination.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Somatic generation of antibody diversity

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

In-depth determination and analysis of the human paired heavy- and light-chain antibody repertoire

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Rapid development of broadly influenza neutralizing antibodies through redundant mutations

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Clonal selection in the germinal centre by regulated proliferation and hypermutation

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Secondary immunization generates clonally related antigen-specific plasma cells and memory B cells.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

One percent of human circulating B lymphocytes are capable of producing the natural anti-Gal antibody

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Multi Step Selection in Ig H Chains is Initially Focused on CDR3 and Then on Other CDR Regions.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Limits for antibody affinity maturation and repertoire diversification in hypervaccinated humans

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Benchmarking the performance of human antibody gene alignment utilities using a 454 sequence dataset.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Diversity in the CDR3 region of V(H) is sufficient for most antibody specificities

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4601265

Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies

23 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.3389%2FFIMMU.2015.00531

Human IgG subclass pattern of inducing complement-mediated cytolysis depends on antigen concentration and to a lesser extent on epitope patchiness, antibody affinity and complement concentration

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.3389%2FFIMMU.2015.00531

IgG2 subclass restriction of antibody to pneumococcal polysaccharides

21 January 2018

1 reference

12 December 2020

IGH V3-23*01 and its allele V3-23*03 differ in their capacity to form the canonical human antibody combining site specific for the capsular polysaccharide of Haemophilus influenzae type b

1 reference

12 December 2020

Kinetic, affinity, and diversity limits of human polyclonal antibody responses against tetanus toxoid

1 reference

12 December 2020

Restricted immunoglobulin VH usage and VDJ combinations in the human response to Haemophilus influenzae type b capsular polysaccharide. Nucleotide sequences of monospecific anti-Haemophilus antibodies and polyspecific antibodies cross-reacting with

1 reference

12 December 2020

Identifiers

DOI

10.3389/FIMMU.2015.00531

1 reference

12 August 2017

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12 August 2017

PubMed publication ID

26528292

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