Folding of noncoding RNAs during transcription facilitated by pausing-induced nonnative structures (Q36156699)

12 August 2017

Folding of noncoding RNAs during transcription facilitated by pausing-induced nonnative structures (English)

1 reference

12 August 2017

2

Tobin R Sosnick

1 reference

12 August 2017

Terrence N Wong

1

1 reference

12 August 2017

Tao Pan

series ordinal

3

1 reference

12 August 2017

language of work or name

English

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publication date

6 November 2007

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Proceedings of the National Academy of Sciences of the United States of America

12 August 2017

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12 August 2017

104

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12 August 2017

46

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12 August 2017

17995-18000

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Bacterial RNase P: a new view of an ancient enzyme

12 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

RNA folding during transcription

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Structure of ribonuclease P--a universal ribozyme.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

tmRNA and associated ligands: a puzzling relationship.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Structural insights into the signal recognition particle

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

RNA folding: models and perspectives

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Folding mechanisms of group I ribozymes: role of stability and contact order

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Secondary structure prediction for aligned RNA sequences

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Beyond kinetic traps in RNA folding

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

The signal recognition particle

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

RNA polymerases from Bacillus subtilis and Escherichia coli differ in recognition of regulatory signals in vitro

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Recent insights on RNA folding mechanisms from catalytic RNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

The SsrA-SmpB system for protein tagging, directed degradation and ribosome rescue

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Modeling RNA folding paths with pseudoknots: application to hepatitis delta virus ribozyme

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Folding of a large ribozyme during transcription and the effect of the elongation factor NusA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Ribonuclease P: unity and diversity in a tRNA processing ribozyme

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Information processing by RNA polymerase: recognition of regulatory signals during RNA chain elongation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Slow folding kinetics of RNase P RNA.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Kinetic oligonucleotide hybridization for monitoring kinetic folding of large RNAs

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Quantitative analysis of transcriptional pausing by Escherichia coli RNA polymerase: his leader pause site as paradigm

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Sites of initiation and pausing in the Escherichia coli rnpB (M1 RNA) transcript.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Amino acid changes in conserved regions of the beta-subunit of Escherichia coli RNA polymerase alter transcription pausing and termination.

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Long-Range Structure in Ribonuclease P RNA

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2084285

Kinetics and thermodynamics make different contributions to RNA folding in vitro and in yeast

2 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0705038104

The Speed of RNA Transcription and Metabolite Binding Kinetics Operate an FMN Riboswitch

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0705038104

Crystal structure of the RNA component of bacterial ribonuclease P

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0705038104

Kinetic intermediates in RNA folding

21 January 2018

1 reference

12 December 2020

Intermediates and kinetic traps in the folding of a large ribozyme revealed by circular dichroism and UV absorbance spectroscopies and catalytic activity

1 reference

12 December 2020

Rapid purification of His(6)-tagged Bacillus subtilis core RNA polymerase

1 reference

12 December 2020

Kinetic analysis of the M1 RNA folding pathway

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0705038104

1 reference

release_bsdgofg7q5faln3ric2rd5ffki

12 August 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/bsdgofg7q5faln3ric2rd5ffki

24 November 2022

mapped directly with Wikidata item

1 reference

12 August 2017

PubMed publication ID

17986617

1 reference