Massively multiplex single-cell Hi-C. (Q36263741)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28135255%20AND%20SRC:MED&resulttype=core&format=json

10 April 2020

title

Massively multiplex single-cell Hi-C (English)

1 reference

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10 April 2020

7

1 reference

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10 April 2020

Vijay Ramani

1

1 reference

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10 April 2020

Z Duan

8

1 reference

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10 April 2020

9

Jay Shendure

1 reference

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10 April 2020

5

Frank J Steemers

1 reference

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10 April 2020

6

Christine M Disteche

1 reference

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10 April 2020

author name string

Xinxian Deng

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28135255%20AND%20SRC:MED&resulttype=core&format=json

10 April 2020

Ruolan Qiu

3

1 reference

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10 April 2020

Kevin L Gunderson

4

1 reference

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10 April 2020

publication date

30 January 2017

1 reference

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10 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28135255%20AND%20SRC:MED&resulttype=core&format=json

10 April 2020

volume

14

1 reference

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10 April 2020

issue

3

1 reference

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10 April 2020

page(s)

263-266

1 reference

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describes a project that uses

10 April 2020

1 reference

10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=5330809

exact match

https://scigraph.springernature.com/pub.10.1038/nmeth.4155

0 references

cites work

Understanding Spatial Genome Organization: Methods and Insights

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

HiC-Pro: an optimized and flexible pipeline for Hi-C data processing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Genome-wide detection of DNase I hypersensitive sites in single cells and FFPE tissue samples.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Single-cell ChIP-seq reveals cell subpopulations defined by chromatin state

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Bipartite structure of the inactive mouse X chromosome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

High-throughput determination of RNA structure by proximity ligation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Multiplex single cell profiling of chromatin accessibility by combinatorial cellular indexing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Megabase-scale deletion using CRISPR/Cas9 to generate a fully haploid human cell line

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Organization of the mitotic chromosome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

The haplotype-resolved genome and epigenome of the aneuploid HeLa cancer cell line

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Ebola virus entry requires the cholesterol transporter Niemann-Pick C1

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Genomics tools for unraveling chromosome architecture

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

A three-dimensional model of the yeast genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Direct observation of individual endogenous protein complexes in situ by proximity ligation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Capturing chromosome conformation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Chromosome territories, nuclear architecture and gene regulation in mammalian cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5330809

Sequencing thousands of single-cell genomes with combinatorial indexing.

30 September 2017

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.4155

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NMETH.4155

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28135255%20AND%20SRC:MED&resulttype=core&format=json

10 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28135255%20AND%20SRC:MED&resulttype=core&format=json

10 April 2020

1 reference