BacWGSTdb, a database for genotyping and source tracking bacterial pathogens. (Q36434539)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26433226%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

title

BacWGSTdb, a database for genotyping and source tracking bacterial pathogens (English)

1 reference

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25 February 2020

0 references

1

1 reference

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25 February 2020

author name string

Ye Feng

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26433226%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

language of work or name

English

0 references

publication date

3 October 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26433226%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

published in

Nucleic Acids Research

1 reference

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25 February 2020

volume

44

1 reference

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25 February 2020

issue

D1

1 reference

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25 February 2020

page(s)

D682-7

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Creative Commons Attribution-NonCommercial 4.0 International

25 February 2020

copyright license

start time

14 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Content discovery and retrieval services at the European Nucleotide Archive

1 reference

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Using multilocus sequence typing to study bacterial variation: prospects in the genomic era.

30 September 2017

1 reference

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Population dynamics of an Acinetobacter baumannii clonal complex during colonization of patients

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Genome-wide identification of Acinetobacter baumannii genes necessary for persistence in the lung

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

A Gene-By-Gene Approach to Bacterial Population Genomics: Whole Genome MLST of Campylobacter.

30 September 2017

1 reference

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New insights into dissemination and variation of the health care-associated pathogen Acinetobacter baumannii from genomic analysis

30 September 2017

1 reference

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PATRIC, the bacterial bioinformatics database and analysis resource

30 September 2017

1 reference

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Rapid bacterial genome sequencing: methods and applications in clinical microbiology

30 September 2017

1 reference

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Automated extraction of typing information for bacterial pathogens from whole genome sequence data: Neisseria meningitidis as an exemplar.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Overview of molecular typing methods for outbreak detection and epidemiological surveillance.

30 September 2017

1 reference

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Pathogen typing in the genomics era: MLST and the future of molecular epidemiology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Next-generation sequencing technologies and their impact on microbial genomics.

30 September 2017

1 reference

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Transforming clinical microbiology with bacterial genome sequencing.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Rapid whole-genome sequencing of bacterial pathogens in the clinical microbiology laboratory--pipe dream or reality?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

The Sequence Read Archive: explosive growth of sequencing data.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Molecular epidemiology of carbapenem-nonsusceptible Acinetobacter baumannii in the United States.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

BIGSdb: Scalable analysis of bacterial genome variation at the population level.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

TreeVector: scalable, interactive, phylogenetic trees for the web

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

NCBI BLAST: a better web interface

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Multilocus sequence typing of bacteria

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

The multilocus sequence typing network: mlst.net

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Prospects for inferring very large phylogenies by using the neighbor-joining method

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Versatile and open software for comparing large genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

The neighbor-joining method: a new method for reconstructing phylogenetic trees

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Risk factors and outcome analysis of acinetobacter baumannii complex bacteremia in critical patients

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Wide distribution of CC92 carbapenem-resistant and OXA-23-producing Acinetobacter baumannii in multiple provinces of China.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

MLST revisited: the gene-by-gene approach to bacterial genomics.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

Clearcut: a fast implementation of relaxed neighbor joining.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4702769

21 October 2018

Identifiers

DOI

10.1093/NAR/GKV1004

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26433226%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26433226%20AND%20SRC:MED&resulttype=core&format=json

25 February 2020

PubMed publication ID

26433226

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26433226%20AND%20SRC:MED&resulttype=core&format=json