PATRIC, the bacterial bioinformatics database and analysis resource (Q34384755)

1 August 2017

PATRIC, the bacterial bioinformatics database and analysis resource (English)

1 reference

1 August 2017

0 references

1 reference

Andrew Warren

22

0 references

Timothy Driscoll

object named as

Timothy Driscoll

5

0 references

Ross Overbeek

15

object named as

Ross Overbeek

1 reference

1 August 2017

Alice R Wattam

1

1 reference

1 August 2017

David Abraham

2

1 reference

1 August 2017

Oral Dalay

3

1 reference

1 August 2017

Terry L Disz

4

1 reference

1 August 2017

Joseph L Gabbard

6

1 reference

1 August 2017

Joseph J Gillespie

7

1 reference

1 August 2017

Roger Gough

8

1 reference

1 August 2017

Deborah Hix

9

1 reference

1 August 2017

Ronald Kenyon

10

1 reference

1 August 2017

Dustin Machi

11

1 reference

1 August 2017

Chunhong Mao

12

1 reference

1 August 2017

Eric K Nordberg

13

1 reference

1 August 2017

Robert Olson

14

1 reference

1 August 2017

Gordon D Pusch

16

1 reference

1 August 2017

Maulik Shukla

17

1 reference

1 August 2017

Julie Schulman

18

1 reference

1 August 2017

Rick L Stevens

19

1 reference

1 August 2017

Daniel E Sullivan

20

1 reference

1 August 2017

Veronika Vonstein

21

1 reference

1 August 2017

Rebecca Will

23

1 reference

1 August 2017

Meredith J C Wilson

24

1 reference

1 August 2017

Hyun Seung Yoo

25

1 reference

1 August 2017

Chengdong Zhang

26

1 reference

1 August 2017

Yan Zhang

27

1 reference

1 August 2017

Bruno W Sobral

28

1 reference

1 August 2017

language of work or name

English

0 references

publication date

12 November 2013

1 reference

1 August 2017

Nucleic Acids Research

1 reference

1 August 2017

42

1 reference

1 August 2017

Database issue

1 reference

1 August 2017

D581-91

1 reference

Creative Commons Attribution 3.0 Unported

1 August 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Bacterial DNA sifted from the Trichoplax adhaerens (Animalia: Placozoa) genome project reveals a putative rickettsial endosymbiont

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

The BioGRID interaction database: 2013 update

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

ArrayExpress update--trends in database growth and links to data analysis tools

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

The RCSB Protein Data Bank: new resources for research and education

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

NCBI GEO: archive for functional genomics data sets--update

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

EuPathDB: the eukaryotic pathogen database

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

Visualizing next-generation sequencing data with JBrowse

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

Multilocus sequence typing of total-genome-sequenced bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

VectorBase: improvements to a bioinformatics resource for invertebrate vector genomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

MMDB: 3D structures and macromolecular interactions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

The IntAct molecular interaction database in 2012

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

KEGG for integration and interpretation of large-scale molecular data sets

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

VFDB 2012 update: toward the genetic diversity and molecular evolution of bacterial virulence factors.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

Structural genomics of infectious disease drug targets: the SSGCID.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

PSICQUIC and PSISCORE: accessing and scoring molecular interactions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

Integration and visualization of host-pathogen data related to infectious diseases.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

Biomolecules in the computer: Jmol to the rescue

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

Phylogeny of gammaproteobacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

Structural genomics and drug discovery for infectious diseases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

FIGfams: yet another set of protein families

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

PIG--the pathogen interaction gateway.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

ARDB--Antibiotic Resistance Genes Database

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

The RAST Server: rapid annotations using subsystems technology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

HealthMap: global infectious disease monitoring through automated classification and visualization of Internet media reports

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

A robust species tree for the alphaproteobacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

National Institute of Allergy and Infectious Diseases bioinformatics resource centers: new assets for pathogen informatics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

PATRIC: the VBI PathoSystems Resource Integration Center

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

MINT: the Molecular INTeraction database

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

MvirDB--a microbial database of protein toxins, virulence factors and antibiotic resistance genes for bio-defence applications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

The Biomolecular Interaction Network Database and related tools 2005 update

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

The Database of Interacting Proteins: 2004 update

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

Molecular epidemiology: focus on infection

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3965095

Database resources of the National Center for Biotechnology Information

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKT1099

Genomic sequence based scanning for drug resistance-associated mutations and evolutionary analysis of multidrug-resistant and extensively drug-resistant Mycobacterium tuberculosis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24225323

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKT1099

1 reference

journals/nar/WattamADDDGGGHKMMNOOPSSSSVWWWYZZS14

1 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

1 August 2017

1 reference