Parallels among positive-strand RNA viruses, reverse-transcribing viruses and double-stranded RNA viruses (Q36438773)

14 August 2017

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title

Parallels among positive-strand RNA viruses, reverse-transcribing viruses and double-stranded RNA viruses (English)

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14 August 2017

Paul Ahlquist

1

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14 August 2017

language of work or name

English

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publication date

1 May 2006

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Nature Reviews Microbiology

14 August 2017

published in

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14 August 2017

volume

4

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14 August 2017

issue

5

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14 August 2017

page(s)

371-382

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Evolutionary aspects of recombination in RNA viruses

14 August 2017

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The Birnavirus Crystal Structure Reveals Structural Relationships among Icosahedral Viruses

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Replicase-binding sites on plus- and minus-strand brome mosaic virus RNAs and their roles in RNA replication in plant cells

31 March 2020

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The Mauriceville plasmid reverse transcriptase can initiate cDNA synthesis de novo and may be related to reverse transcriptase and DNA polymerase progenitor

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Identification of the Hepatitis C Virus RNA Replication Complex in Huh-7 Cells Harboring Subgenomic Replicons

31 March 2020

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Alphavirus RNA replicase is located on the cytoplasmic surface of endosomes and lysosomes

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Flock house virus RNA replicates on outer mitochondrial membranes in Drosophila cells.

31 March 2020

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Detection and subcellular localization of the turnip yellow mosaic virus 66K replication protein in infected cells

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Role of HIV-1 Gag domains in viral assembly

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Characterization of Moloney murine leukemia virus p12 mutants blocked during early events of infection.

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Structural analyses of purified human immunodeficiency virus type 1 intracellular reverse transcription complexes

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Ty element transposition: reverse transcriptase and virus-like particles

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The DNA intermediate in yeast Ty1 element transposition copurifies with virus-like particles: cell-free Ty1 transposition

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The stoichiometry of Gag protein in HIV-1.

31 March 2020

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Maintenance of the Gag/Gag-Pol ratio is important for human immunodeficiency virus type 1 RNA dimerization and viral infectivity

31 March 2020

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Structural basis for packaging the dimeric genome of Moloney murine leukaemia virus

31 March 2020

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Helicase and capping enzyme active site mutations in brome mosaic virus protein 1a cause defects in template recruitment, negative-strand RNA synthesis, and viral RNA capping

31 March 2020

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The N-terminal half of the brome mosaic virus 1a protein has RNA capping-associated activities: specificity for GTP and S-adenosylmethionine

31 March 2020

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A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids

31 March 2020

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Brome mosaic virus polymerase-like protein 2a is directed to the endoplasmic reticulum by helicase-like viral protein 1a

31 March 2020

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An alternate pathway for recruiting template RNA to the brome mosaic virus RNA replication complex

31 March 2020

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Brome mosaic virus RNA replication protein 1a dramatically increases in vivo stability but not translation of viral genomic RNA3.

31 March 2020

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Brome mosaic virus Protein 1a recruits viral RNA2 to RNA replication through a 5' proximal RNA2 signal

31 March 2020

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Identification of sequences in Brome mosaic virus replicase protein 1a that mediate association with endoplasmic reticulum membranes

31 March 2020

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31 March 2020

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COP and clathrin-coated vesicle budding: different pathways, common approaches

31 March 2020

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31 March 2020

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Characterization of rubella virus replication complexes using antibodies to double-stranded RNA.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Biogenesis of the Semliki Forest virus RNA replication complex

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Hepatitis C virus non-structural proteins in the probable membranous compartment function in viral genome replication

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Quantitative Analysis of the Hepatitis C Virus Replication Complex

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Visualization and functional analysis of RNA-dependent RNA polymerase lattices

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Role of an internal and two 3'-terminal RNA elements in assembly of tombusvirus replicase

31 March 2020

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Properly folded nonstructural polyprotein directs the semliki forest virus replication complex to the endosomal compartment

31 March 2020

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Expression of hepatitis C virus proteins induces distinct membrane alterations including a candidate viral replication complex

31 March 2020

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Membrane rearrangement and vesicle induction by recombinant poliovirus 2C and 2BC in human cells

31 March 2020

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Requirements for assembly of poliovirus replication complexes and negative-strand RNA synthesis

31 March 2020

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Overexpression of the HIV-1 gag-pol polyprotein results in intracellular activation of HIV-1 protease and inhibition of assembly and budding of virus-like particles

31 March 2020

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The role of the p33:p33/p92 interaction domain in RNA replication and intracellular localization of p33 and p92 proteins of Cucumber necrosis tombusvirus

31 March 2020

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In vitro mutagenesis of the putative replicase genes of tobacco mosaic virus

31 March 2020

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A mutant allele of essential, general translation initiation factor DED1 selectively inhibits translation of a viral mRNA

31 March 2020

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Yeast mutations in multiple complementation groups inhibit brome mosaic virus RNA replication and transcription and perturb regulated expression of the viral polymerase-like gene

31 March 2020

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Phosphorylation of cucumber mosaic virus RNA polymerase 2a protein inhibits formation of replicase complex

31 March 2020

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NIa and NIb of Peanut Stripe Potyvirus Are Present in the Nucleus of Infected Cells, but Do Not Form Inclusions

31 March 2020

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Novel gene expression mechanism in a fission yeast retroelement: Tf1 proteins are derived from a single primary translation product

31 March 2020

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A long terminal repeat-containing retrotransposon of Schizosaccharomyces pombe expresses a Gag-like protein that assembles into virus-like particles which mediate reverse transcription.

31 March 2020

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Three-dimensional structure of the M-MuLV CA protein on a lipid monolayer: a general model for retroviral capsid assembly

31 March 2020

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Alternate, virus-induced membrane rearrangements support positive-strand RNA virus genome replication

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Characterization of the hepatitis C virus RNA replication complex associated with lipid rafts

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

RNA replication of mouse hepatitis virus takes place at double-membrane vesicles

31 March 2020

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Induction of intracellular membrane rearrangements by HAV proteins 2C and 2BC.

31 March 2020

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Genome replication and packaging of segmented double-stranded RNA viruses

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Tentative identification of RNA-dependent RNA polymerases of dsRNA viruses and their relationship to positive strand RNA viral polymerases

31 March 2020

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Evidence for common ancestry of a chestnut blight hypovirulence-associated double-stranded RNA and a group of positive-strand RNA plant viruses

31 March 2020

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Structure of the reovirus core at 3.6 A resolution

31 March 2020

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Reovirus polymerase λ3 localized by cryo-electron microscopy of virions at a resolution of 7.6 Å

31 March 2020

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RNA helicase activity of Semliki Forest virus replicase protein NSP2.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Identification of a Novel Function of theAlphavirusCapping Apparatus

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1389

The helicase-like domain of plant potexvirus replicase participates in formation of RNA 5' cap structure by exhibiting RNA 5'-triphosphatase activity

31 March 2020

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Brome mosaic virus 1a nucleoside triphosphatase/helicase domain plays crucial roles in recruiting RNA replication templates.

31 March 2020

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Characterization of the nucleoside triphosphate phosphohydrolase and helicase activities of the reovirus lambda1 protein

31 March 2020

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Characterization of the reovirus lambda1 protein RNA 5'-triphosphatase activity

31 March 2020

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Binding site for S-adenosyl-L-methionine in a central region of mammalian reovirus lambda2 protein. Evidence for activities in mRNA cap methylation.

31 March 2020

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Identification of the guanylyltransferase region and active site in reovirus mRNA capping protein lambda2.

31 March 2020

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Characterization of the AdoMet-dependent guanylyltransferase activity that is associated with the N terminus of bamboo mosaic virus replicase

31 March 2020

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Nonspecific nucleoside triphosphatase P4 of double-stranded RNA bacteriophage phi6 is required for single-stranded RNA packaging and transcription

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

RNA packaging device of double-stranded RNA bacteriophages, possibly as simple as hexamer of P4 protein.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Oligomerization and activity of the helicase domain of the tobacco mosaic virus 126- and 183-kilodalton replicase proteins

31 March 2020

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Rotavirus protein involved in genome replication and packaging exhibits a HIT-like fold

31 March 2020

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Nonstructural proteins involved in genome packaging and replication of rotaviruses and other members of the Reoviridae

31 March 2020

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Nucleoside and RNA triphosphatase activities of orthoreovirus transcriptase cofactor mu2

31 March 2020

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RNA-dependent RNA polymerases, viruses, and RNA silencing

31 March 2020

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Rotavirus replication: plus-sense templates for double-stranded RNA synthesis are made in viroplasms

31 March 2020

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Poliovirus escape from RNA interference: short interfering RNA-target recognition and implications for therapeutic approaches

31 March 2020

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Terminal sequences of Sindbis virus-specific nucleic acids: identity in molecules synthesized in vertebrate and insect cells and characteristic properties of the replicative form RNA.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1389

Double-stranded RNAs of cucumber mosaic virus and its satellite contain an unpaired terminal guanosine: implications for replication

31 March 2020

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Translocation portals for the substrates and products of a viral transcription complex: the bluetongue virus core.

31 March 2020

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Structure of the RNA-dependent RNA polymerase of poliovirus

31 March 2020

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Crystal structure of the RNA-dependent RNA polymerase from hepatitis C virus reveals a fully encircled active site

31 March 2020

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Conferring RNA polymerase activity to a DNA polymerase: a single residue in reverse transcriptase controls substrate selection

31 March 2020

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Novel infectious particles generated by expression of the vesicular stomatitis virus glycoprotein from a self-replicating RNA.

31 March 2020

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New insights into the mechanisms of RNA recombination

31 March 2020

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Viral and host determinants of RNA virus vector replication and expression

31 March 2020

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Silencing the morphogenesis of rotavirus.

31 March 2020

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Rotavirus glycoprotein NSP4 is a modulator of viral transcription in the infected cell.

31 March 2020

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The origin of phospholipids of the enveloped bacteriophage phi6

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Mutation of host delta9 fatty acid desaturase inhibits brome mosaic virus RNA replication between template recognition and RNA synthesis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1389

Membrane Synthesis, Specific Lipid Requirements, and Localized Lipid Composition Changes Associated with a Positive-Strand RNA Virus RNA Replication Protein

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1389

Plasma membrane rafts play a critical role in HIV-1 assembly and release

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Systematic, genome-wide identification of host genes affecting replication of a positive-strand RNA virus

31 March 2020

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Hepadnavirus assembly and reverse transcription require a multi-component chaperone complex which is incorporated into nucleocapsids

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

Mutation of host DnaJ homolog inhibits brome mosaic virus negative-strand RNA synthesis

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO1389

HIV-1 inactivation by nucleic acid aptamers.

31 March 2020

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Significance in Replication of the Terminal Nucleotides of the Flavivirus Genome

31 March 2020

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Two distinct mechanisms ensure transcriptional polarity in double-stranded RNA bacteriophages

31 March 2020

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A brome mosaic virus intergenic RNA3 replication signal functions with viral replication protein 1a to dramatically stabilize RNA in vivo.

31 March 2020

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12 December 2020

Open reading frame 1a-encoded subunits of the arterivirus replicase induce endoplasmic reticulum-derived double-membrane vesicles which carry the viral replication complex

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12 December 2020

Coronavirus genomic and subgenomic minus-strand RNAs copartition in membrane-protected replication complexes

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12 December 2020

The alphaviruses: gene expression, replication, and evolution

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12 December 2020

Analysis of the role of brome mosaic virus 1a protein domains in RNA replication, using linker insertion mutagenesis

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12 December 2020

Interactions between the structural domains of the RNA replication proteins of plant-infecting RNA viruses.

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12 December 2020

Expression of the gag-pol fusion protein of Moloney murine leukemia virus without gag protein does not induce virion formation or proteolytic processing

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12 December 2020

Cellular origin and ultrastructure of membranes induced during poliovirus infection

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12 December 2020

Sindbis virus RNA polymerase is degraded by the N-end rule pathway

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12 December 2020

Sindbis virus proteins nsP1 and nsP2 contain homology to nonstructural proteins from several RNA plant viruses

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12 December 2020

Double-stranded RNA viruses of Saccharomyces cerevisiae.

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12 December 2020

Foamy viruses are unconventional retroviruses

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12 December 2020

Brome mosaic virus RNA replication proteins 1a and 2a from a complex in vitro

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12 December 2020

Cryo-electron microscopy structure of yeast Ty retrotransposon virus-like particles.

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12 December 2020

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12 December 2020

Specific cessation of minus-strand RNA accumulation at an early stage of tobacco mosaic virus infection

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12 December 2020

Biological activities of hybrid RNAs generated by 3'-end exchanges between tobacco mosaic and brome mosaic viruses

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12 December 2020

Cytoplasmic Structures Associated with an Arbovirus Infection: Loci of Viral Ribonucleic Acid Synthesis

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12 December 2020

RNA recombination in animal and plant viruses

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12 December 2020

Brome mosaic virus helicase- and polymerase-like proteins colocalize on the endoplasmic reticulum at sites of viral RNA synthesis

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12 December 2020

Putative RNA capping activities encoded by brome mosaic virus: methylation and covalent binding of guanylate by replicase protein 1a

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12 December 2020

Identification of the domains required for direct interaction of the helicase-like and polymerase-like RNA replication proteins of brome mosaic virus

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12 December 2020

Brome mosaic virus RNA replication proteins 1a and 2a colocalize and 1a independently localizes on the yeast endoplasmic reticulum

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12 December 2020

Expression of human immunodeficiency virus type 1 reverse transcriptase in trans during virion release and after infection

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12 December 2020

Mutagenesis of the in-frame opal termination codon preceding nsP4 of Sindbis virus: studies of translational readthrough and its effect on virus replication

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12 December 2020

Use of DNA, RNA, and chimeric templates by a viral RNA-dependent RNA polymerase: evolutionary implications for the transition from the RNA to the DNA world.

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12 December 2020

Intracellular trafficking of HIV-1 Gag: how Gag interacts with cell membranes and makes viral particles.

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12 December 2020

Ultrastructure of Kunjin virus-infected cells: colocalization of NS1 and NS3 with double-stranded RNA, and of NS2B with NS3, in virus-induced membrane structures

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12 December 2020

Reversible dissociation of the poliovirus replication complex: functions and interactions of its components in viral RNA synthesis

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12 December 2020

Identifiers

DOI

10.1038/NRMICRO1389

1 reference

Dimensions Publication ID

14 August 2017

1034618600

0 references

1 reference