Somatic copy number mosaicism in human skin revealed by induced pluripotent stem cells (Q36493686)

14 August 2017

Somatic copy number mosaicism in human skin revealed by induced pluripotent stem cells (English)

1 reference

Human Induced Pluripotent Stem Cells

14 August 2017

1 reference

Nathaniel E Calixto

12

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Dean Palejev

Dean Palejev

3

0 references

Alexej Abyzov

Alexej Abyzov

1

0 references

Flora M. Vaccarino

Flora M Vaccarino

19

0 references

Mark Bender Gerstein

18

Mark Gerstein

1 reference

14 August 2017

15

Katarzyna Chawarska

1 reference

14 August 2017

13

Elena L Grigorenko

1 reference

14 August 2017

17

Alexander Eckehart Urban

1 reference

14 August 2017

16

Sherman Weissman

1 reference

14 August 2017

Jessica Mariani

2

1 reference

14 August 2017

Ying Zhang

4

1 reference

14 August 2017

Michael Seamus Haney

5

1 reference

14 August 2017

Livia Tomasini

6

1 reference

14 August 2017

Anthony F Ferrandino

7

1 reference

14 August 2017

Lior A Rosenberg Belmaker

8

1 reference

14 August 2017

Anna Szekely

9

1 reference

14 August 2017

Michael Wilson

10

1 reference

14 August 2017

Arif Kocabas

11

1 reference

14 August 2017

Anita Huttner

14

1 reference

14 August 2017

language of work or name

English

0 references

publication date

18 November 2012

1 reference

14 August 2017

5

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inferred from page(s)

published in

Nature

1 reference

14 August 2017

492

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14 August 2017

7429

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14 August 2017

438-442

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An integrated encyclopedia of DNA elements in the human genome

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Homozygous PLCB1 deletion associated with malignant migrating partial seizures in infancy

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Low incidence of DNA sequence variation in human induced pluripotent stem cells generated by nonintegrating plasmid expression

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Genome-wide mapping of copy number variation in humans: comparative analysis of high resolution array platforms

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Somatic retrotransposition alters the genetic landscape of the human brain

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

High-throughput droplet digital PCR system for absolute quantitation of DNA copy number

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Concise review: the promise of human induced pluripotent stem cell-based studies of schizophrenia

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Hydroxyurea induces de novo copy number variants in human cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Genome sequencing of mouse induced pluripotent stem cells reveals retroelement stability and infrequent DNA rearrangement during reprogramming

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Multiple Recurrent De Novo CNVs, Including Duplications of the 7q11.23 Williams Syndrome Region, Are Strongly Associated with Autism

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Somatic mosaicism in healthy human tissues

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Genetic correction and analysis of induced pluripotent stem cells from a patient with gyrate atrophy.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Copy number variation and selection during reprogramming to pluripotency

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Mapping copy number variation by population-scale genome sequencing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Investigating synapse formation and function using human pluripotent stem cell-derived neurons

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

AGE: defining breakpoints of genomic structural variants at single-nucleotide resolution, through optimal alignments with gap excision

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Dynamic changes in the copy number of pluripotency and cell proliferation genes in human ESCs and iPSCs during reprogramming and time in culture

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Annual Research Review: The promise of stem cell research for neuropsychiatric disorders

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

RSEQtools: a modular framework to analyze RNA-Seq data using compact, anonymized data summaries

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Differentiated Parkinson patient-derived induced pluripotent stem cells grow in the adult rodent brain and reduce motor asymmetry in Parkinsonian rats

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Missing heritability and strategies for finding the underlying causes of complex disease

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Early embryonic chromosome instability results in stable mosaic pattern in human tissues

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Fast and accurate long-read alignment with Burrows-Wheeler transform

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Nucleotide-resolution analysis of structural variants using BreakSeq and a breakpoint library

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Live cell imaging distinguishes bona fide human iPS cells from partially reprogrammed cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Modelling pathogenesis and treatment of familial dysautonomia using patient-specific iPSCs.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

L1 retrotransposition in human neural progenitor cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

The Sequence Alignment/Map format and SAMtools

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

TopHat: discovering splice junctions with RNA-Seq

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

PEMer: a computational framework with simulation-based error models for inferring genomic structural variants from massive paired-end sequencing data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Extensive genomic copy number variation in embryonic stem cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Studying copy number variations using a nanofluidic platform

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Disease-specific induced pluripotent stem cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Copy number variant analysis of human embryonic stem cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Generation of human induced pluripotent stem cells from dermal fibroblasts

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Induction of pluripotent stem cells from adult human fibroblasts by defined factors

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Induced pluripotent stem cell lines derived from human somatic cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Epigenetic reprogramming of OCT4 and NANOG regulatory regions by embryonal carcinoma cell extract

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Development of bioinformatics resources for display and analysis of copy number and other structural variants in the human genome.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Constitutional aneuploidy in the normal human brain.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Sequential DNA methylation of the Nanog and Oct-4 upstream regions in human NT2 cells during neuronal differentiation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Mechanisms and consequences of somatic mosaicism in humans

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

MSB: a mean-shift-based approach for the analysis of structural variation in the genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

Identification and Classification of Chromosomal Aberrations in Human Induced Pluripotent Stem Cells

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3532053

High resolution array-CGH characterization of human stem cells using a stem cell focused microarray

4 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23160490

12 December 2020

inferred from PubMed ID database lookup

Somatic mosaicism for copy number variation in differentiated human tissues

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23160490

12 December 2020

inferred from PubMed ID database lookup

Extensive genetic variation in somatic human tissues

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNATURE11629

7 January 2021

inferred from DOI database lookup

Somatic activation of AKT3 causes hemispheric developmental brain malformations

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNATURE11629

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NATURE11629

1 reference

14 August 2017

1 reference

14 August 2017

PubMed publication ID

23160490

1 reference