Assessing differential expression measurements by highly parallel pyrosequencing and DNA microarrays: a comparative study. (Q36533791)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21919703%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

title

Assessing differential expression measurements by highly parallel pyrosequencing and DNA microarrays: a comparative study (English)

1 reference

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12 February 2020

1 reference

8

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12 February 2020

Joaquin Arino

1

1 reference

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12 February 2020

Laia Pedrola

4

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12 February 2020

Javier Santoyo-Lopez

7

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author name string

Antonio Casamayor

2

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12 February 2020

Julián Perez Pérez

3

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12 February 2020

Miguel Álvarez-Tejado

5

1 reference

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12 February 2020

Martina Marbà

6

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publication date

15 September 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21919703%20AND%20SRC:MED&resulttype=core&format=json

OMICS A Journal of Integrative Biology

12 February 2020

published in

1 reference

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volume

17

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issue

1

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12 February 2020

page(s)

53-59

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describes a project that uses

12 February 2020

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/3545353

based on heuristic

inferred from PubMed Central ID database lookup

cites work

From RNA-seq reads to differential expression results

1 reference

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Integrative responses to high pH stress in S. cerevisiae

30 September 2017

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

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Fast and accurate long-read alignment with Burrows-Wheeler transform

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Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel gene expression microarrays

30 September 2017

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Repeatability of published microarray gene expression analyses

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RNA-Seq: a revolutionary tool for transcriptomics

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A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

30 September 2017

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RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

30 September 2017

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Stem cell transcriptome profiling via massive-scale mRNA sequencing

30 September 2017

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

30 September 2017

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The transcriptional landscape of the yeast genome defined by RNA sequencing

30 September 2017

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Transcript profiling by 3'-untranslated region sequencing resolves expression of gene families

30 September 2017

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30 September 2017

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SNF1/AMPK pathways in yeast

30 September 2017

1 reference

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High-density yeast-tiling array reveals previously undiscovered introns and extensive regulation of meiotic splicing

30 September 2017

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A large-scale full-length cDNA analysis to explore the budding yeast transcriptome

30 September 2017

1 reference

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The transcriptional response of the yeast Na(+)-ATPase ENA1 gene to alkaline stress involves three main signaling pathways.

30 September 2017

1 reference

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The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

30 September 2017

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Characterization of the calcium-mediated response to alkaline stress in Saccharomyces cerevisiae.

30 September 2017

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The transcription factor Rim101p governs ion tolerance and cell differentiation by direct repression of the regulatory genes NRG1 and SMP1 in Saccharomyces cerevisiae.

30 September 2017

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The transcriptional response to alkaline pH in Saccharomyces cerevisiae: evidence for calcium-mediated signalling

30 September 2017

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Alkaline response genes of Saccharomyces cerevisiae and their relationship to the RIM101 pathway

30 September 2017

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A concise guide to cDNA microarray analysis

30 September 2017

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Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

30 September 2017

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Direct regulation of genes involved in glucose utilization by the calcium/calcineurin pathway.

21 September 2018

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21 September 2018

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Signaling Alkaline pH Stress in the YeastSaccharomyces cerevisiaethrough the Wsc1 Cell Surface Sensor and the Slt2 MAPK Pathway

21 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21919703

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1089/OMI.2011.0065

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21919703%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21919703%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference