Promoter cross-talk via a shared enhancer explains paternally biased expression of Nctc1 at the Igf2/H19/Nctc1 imprinted locus. (Q36559183)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23221643%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

title

Promoter cross-talk via a shared enhancer explains paternally biased expression of Nctc1 at the Igf2/H19/Nctc1 imprinted locus (English)

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19 February 2020

3

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19 February 2020

Karl Pfeifer

5

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19 February 2020

author name string

Bokkee Eun

1

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19 February 2020

Megan L Sampley

2

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19 February 2020

Claudia M Gebert

4

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19 February 2020

language of work or name

English

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publication date

4 December 2012

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19 February 2020

published in

Nucleic Acids Research

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19 February 2020

volume

41

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19 February 2020

issue

2

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19 February 2020

page(s)

817-826

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Creative Commons Attribution-NonCommercial 3.0 Unported

19 February 2020

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus

30 September 2017

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A randomly integrated transgenic H19 imprinting control region acquires methylation imprinting independently of its establishment in germ cells

30 September 2017

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CTCF regulates allelic expression of Igf2 by orchestrating a promoter-polycomb repressive complex 2 intrachromosomal loop

30 September 2017

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Cohesin mediates transcriptional insulation by CCCTC-binding factor

30 September 2017

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Cohesins localize with CTCF at the KSHV latency control region and at cellular c-myc and H19/Igf2 insulators

30 September 2017

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30 September 2017

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A facilitated tracking and transcription mechanism of long-range enhancer function

30 September 2017

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30 September 2017

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30 September 2017

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CTCF binding at the H19 imprinting control region mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to Igf2

30 September 2017

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30 September 2017

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An insulator blocks spreading of histone acetylation and interferes with RNA polymerase II transfer between an enhancer and gene

30 September 2017

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Active genes dynamically colocalize to shared sites of ongoing transcription

30 September 2017

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30 September 2017

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30 September 2017

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30 September 2017

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An intragenic methylated region in the imprinted Igf2 gene augments transcription.

30 September 2017

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30 September 2017

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30 September 2017

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A transcriptional insulator at the imprinted H19/Igf2 locus

30 September 2017

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CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

30 September 2017

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Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

30 September 2017

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H19 and Igf2 monoallelic expression is regulated in two distinct ways by a shared cis acting regulatory region upstream of H19.

30 September 2017

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Comparative genomic sequencing identifies novel tissue-specific enhancers and sequence elements for methylation-sensitive factors implicated in Igf2/H19 imprinting

30 September 2017

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Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and Igf2.

30 September 2017

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A 5' 2-kilobase-pair region of the imprinted mouse H19 gene exhibits exclusive paternal methylation throughout development

30 September 2017

1 reference

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An enhancer deletion affects both H19 and Igf2 expression

30 September 2017

1 reference

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Disruption of imprinting caused by deletion of the H19 gene region in mice

30 September 2017

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Two regulatory domains flank the mouse H19 gene

30 September 2017

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Ectopic expression of the H19 gene in mice causes prenatal lethality

30 September 2017

1 reference

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Relative quantitation of restriction fragment length polymorphic DNAs via DNA melting analysis provides an effective way to determine allele frequencies.

30 September 2017

1 reference

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Interaction between differentially methylated regions partitions the imprinted genes Igf2 and H19 into parent-specific chromatin loops

21 September 2018

1 reference

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The beta-globin nuclear compartment in development and erythroid differentiation

21 September 2018

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Epigenetic modifications in an imprinting cluster are controlled by a hierarchy of DMRs suggesting long-range chromatin interactions.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553941

Elucidation of the minimal sequence required to imprint H19 transgenes.

21 September 2018

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Deletion of a silencer element in Igf2 results in loss of imprinting independent of H19.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553941

Maternal-specific footprints at putative CTCF sites in the H19 imprinting control region give evidence for insulator function.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553941

Appropriate expression of the mouse H19 gene utilises three or more distinct enhancer regions spread over more than 130 kb.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553941

Sequence of a 42-kb mouse region containing the imprinted H19 locus: identification of a novel muscle-specific transcription unit showing biallelic expression

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553941

Imprinting of mouse Kvlqt1 is developmentally regulated.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553941

Epigenetic reprogramming in mouse primordial germ cells

21 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1182

Mapping of INS promoter interactions reveals its role in long-range regulation of SYT8 transcription

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23221643

12 December 2020

inferred from PubMed ID database lookup

Functional association of CTCF with the insulator upstream of the H19 gene is parent of origin-specific and methylation-sensitive

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23221643

12 December 2020

inferred from PubMed ID database lookup

Distinct mechanisms control RNA polymerase II recruitment to a tissue-specific locus control region and a downstream promoter

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23221643

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GKS1182

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23221643%20AND%20SRC:MED&resulttype=core&format=json

release_zvueqgmghfb2batr7hjddhegza

19 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/zvueqgmghfb2batr7hjddhegza

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23221643%20AND%20SRC:MED&resulttype=core&format=json

19 February 2020

PubMed publication ID

23221643

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23221643%20AND%20SRC:MED&resulttype=core&format=json