Genomic and Transcriptomic Features of Response to Anti-PD-1 Therapy in Metastatic Melanoma (Q36730827)

15 August 2017

Genomic and Transcriptomic Features of Response to Anti-PD-1 Therapy in Metastatic Melanoma. (English)

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15 August 2017

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9

Bartosz Chmielowski

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15 August 2017

17

Antoni Ribas

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15 August 2017

6

Siwen Hu-Lieskovan

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15 August 2017

7

Beata Berent-Maoz

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15 August 2017

Willy Hugo

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15 August 2017

Jesse M Zaretsky

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15 August 2017

Lu Sun

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15 August 2017

Chunying Song

4

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15 August 2017

Blanca Homet Moreno

5

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15 August 2017

Jia Pang

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Grace Cherry

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15 August 2017

Elizabeth Seja

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15 August 2017

Shirley Lomeli

12

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15 August 2017

Xiangju Kong

13

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15 August 2017

Mark C Kelley

14

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Jeffrey A Sosman

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Douglas B Johnson

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Roger S Lo

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language of work or name

English

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publication date

15 March 2016

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15 August 2017

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165

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1

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35-44

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Immunogenicity of somatic mutations in human gastrointestinal cancers.

15 August 2017

1 reference

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A Patient-Derived, Pan-Cancer EMT Signature Identifies Global Molecular Alterations and Immune Target Enrichment Following Epithelial-to-Mesenchymal Transition

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1 reference

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Non-genomic and Immune Evolution of Melanoma Acquiring MAPKi Resistance

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1 reference

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Genomic correlates of response to CTLA-4 blockade in metastatic melanoma

30 September 2017

1 reference

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Genomic Classification of Cutaneous Melanoma

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1 reference

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PD-1 Blockade in Tumors with Mismatch-Repair Deficiency

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Cancer immunology. Mutational landscape determines sensitivity to PD-1 blockade in non-small cell lung cancer

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PD-1 blockade induces responses by inhibiting adaptive immune resistance

30 September 2017

1 reference

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The InterPro protein families database: the classification resource after 15 years

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1 reference

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Genetic basis for clinical response to CTLA-4 blockade in melanoma

30 September 2017

1 reference

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Metastasis is regulated via microRNA-200/ZEB1 axis control of tumour cell PD-L1 expression and intratumoral immunosuppression

30 September 2017

1 reference

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Sequenza: allele-specific copy number and mutation profiles from tumor sequencing data.

30 September 2017

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Comprehensive molecular profiling of lung adenocarcinoma

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1 reference

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Control of the immune response by pro-angiogenic factors

30 September 2017

1 reference

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Acquired resistance and clonal evolution in melanoma during BRAF inhibitor therapy

30 September 2017

1 reference

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NetMHCIIpan-3.0, a common pan-specific MHC class II prediction method including all three human MHC class II isotypes, HLA-DR, HLA-DP and HLA-DQ.

30 September 2017

1 reference

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Comprehensive molecular characterization of clear cell renal cell carcinoma

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1 reference

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ATHLATES: accurate typing of human leukocyte antigen through exome sequencing

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1 reference

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Safety and Tumor Responses with Lambrolizumab (Anti–PD-1) in Melanoma

30 September 2017

1 reference

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TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

30 September 2017

1 reference

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GSVA: gene set variation analysis for microarray and RNA-seq data.

30 September 2017

1 reference

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A landscape of driver mutations in melanoma

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4808437

Comprehensive molecular characterization of human colon and rectal cancer

30 September 2017

1 reference

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Safety, activity, and immune correlates of anti-PD-1 antibody in cancer

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4808437

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

30 September 2017

1 reference

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VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4808437

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4808437

30 September 2017

1 reference

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Unraveling the mechanism of BRCA2 in homologous recombination

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1 reference

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Improving RNA-Seq expression estimates by correcting for fragment bias

30 September 2017

1 reference

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Guidelines for the evaluation of immune therapy activity in solid tumors: immune-related response criteria

30 September 2017

1 reference

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

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Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

30 September 2017

1 reference

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NetMHCpan, a method for MHC class I binding prediction beyond humans

30 September 2017

1 reference

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Cancer as an overhealing wound: an old hypothesis revisited

30 September 2017

1 reference

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In vivo switching of human melanoma cells between proliferative and invasive states

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4808437

NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4808437

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

30 September 2017

1 reference

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The mutually regulatory loop of epithelial-mesenchymal transition and immunosuppression in cancer progression

30 September 2017

1 reference

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CCR 20th Anniversary Commentary: Immune-Related Response Criteria--Capturing Clinical Activity in Immuno-Oncology.

28 June 2018

1 reference

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5 September 2018

1 reference

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1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26997480

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Loss of PTEN Promotes Resistance to T Cell-Mediated Immunotherapy.

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26997480

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELL.2016.02.065

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15 August 2017

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15 August 2017

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