Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons (Q36839596)

16 August 2017

Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons (English)

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16 August 2017

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1

Cembrowski MS

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16 August 2017

2

Wang L

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16 August 2017

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Sugino K

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16 August 2017

4

Shields BC

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16 August 2017

5

Spruston N

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16 August 2017

PMCID

4846374

language of work or name

English

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publication date

26 April 2016

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16 August 2017

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16 August 2017

5

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16 August 2017

e14997

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PMCID

4846374

describes a project that uses

16 August 2017

WGCNA

object named as

WGCNA

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

object named as

DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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29 September 2017

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A quantitative comparison of cell-type-specific microarray gene expression profiling methods in the mouse brain

29 September 2017

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29 September 2017

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

29 September 2017

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Are the dorsal and ventral hippocampus functionally distinct structures?

29 September 2017

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Gradients in the brain: the control of the development of form and function in the cerebral cortex

29 September 2017

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A robust and high-throughput Cre reporting and characterization system for the whole mouse brain

29 September 2017

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Genomic-anatomic evidence for distinct functional domains in hippocampal field CA1.

29 September 2017

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TopHat: discovering splice junctions with RNA-Seq

29 September 2017

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

29 September 2017

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Quantitative transcriptional neuroanatomy of the rat hippocampus: evidence for wide-ranging, pathway-specific heterogeneity among three principal cell layers

29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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Molecular taxonomy of major neuronal classes in the adult mouse forebrain

29 September 2017

1 reference

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Defining a molecular atlas of the hippocampus using DNA microarrays and high-throughput in situ hybridization.

29 September 2017

1 reference

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A gene expression atlas of the central nervous system based on bacterial artificial chromosomes

29 September 2017

1 reference

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Single-Cell Microarray Analysis in Hippocampus CA1: Demonstration and Validation of Cellular Heterogeneity

29 September 2017

1 reference

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Regional and strain-specific gene expression mapping in the adult mouse brain

29 September 2017

1 reference

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Gene ontology: tool for the unification of biology

29 September 2017

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KEGG: kyoto encyclopedia of genes and genomes

29 September 2017

1 reference

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Stratum radiatum giant cells: a type of principal cell in the rat hippocampus.

29 September 2017

1 reference

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Distribution of calretinin immunoreactivity in the mouse dentate gyrus: II. Mossy cells, with special reference to their dorsoventral difference in calretinin immunoreactivity

29 September 2017

1 reference

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Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

29 September 2017

1 reference

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Cell type-specific transcriptomics in the brain

27 June 2018

1 reference

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Spatial Gene-Expression Gradients Underlie Prominent Heterogeneity of CA1 Pyramidal Neurons.

27 June 2018

1 reference

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5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4846374

Temporally matched subpopulations of selectively interconnected principal neurons in the hippocampus.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4846374

Quantitative gene-expression analysis of the ligand-receptor system for classical neurotransmitters and neuropeptides in hippocampal CA1, CA3, and dentate gyrus

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4846374

Genomic anatomy of the hippocampus.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4846374

Redefining the boundaries of the hippocampal CA2 subfield in the mouse using gene expression and 3-dimensional reconstruction

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4846374

Semilunar granule cells: glutamatergic neurons in the rat dentate gyrus with axon collaterals in the inner molecular layer

5 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27113915

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Targeting Cre recombinase to specific neuron populations with bacterial artificial chromosome constructs

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27113915

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Transcriptional profiling reveals strict boundaries between hippocampal subregions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27113915

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.7554/ELIFE.14997

1 reference

16 August 2017

1 reference

16 August 2017

1 reference

PMCID

4846374