Noncoding but nonexpendable: transcriptional regulation by large noncoding RNA in eukaryotes (Q36916661)

17 August 2017

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title

Noncoding but nonexpendable: transcriptional regulation by large noncoding RNA in eukaryotes (English)

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17 August 2017

Oya Yazgan

1

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PubMed ID

17713583

17 August 2017

Jocelyn E Krebs

series ordinal

2

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17 August 2017

1 August 2007

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Biochemistry and Cell Biology

17 August 2017

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17 August 2017

85

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17 August 2017

4

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17 August 2017

484-496

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Epigenetic gene regulation by noncoding RNAs

17 August 2017

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Analysis of a new homozygous deletion in the tumor suppressor region at 3p12.3 reveals two novel intronic noncoding RNA genes

21 January 2018

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More than 40,000 transcripts, including novel and noncoding transcripts, in mouse embryonic stem cells

21 January 2018

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Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3.

21 January 2018

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H19 mRNA-like noncoding RNA promotes breast cancer cell proliferation through positive control by E2F1

21 January 2018

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The Air noncoding RNA: an imprinted cis-silencing transcript

21 January 2018

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The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation

21 January 2018

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The transcriptional landscape of the mammalian genome

21 January 2018

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Fewer Genes, More Noncoding RNA

21 January 2018

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Non-coding RNAs: new players in eukaryotic biology

21 January 2018

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STRAL: progressive alignment of non-coding RNA using base pairing probability vectors in quadratic time

21 January 2018

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A high-resolution map of transcription in the yeast genome

21 January 2018

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Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae

21 January 2018

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Non-coding RNA in fly dosage compensation

21 January 2018

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Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression

21 January 2018

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Contributions of Trf4p- and Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome

21 January 2018

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The vertebrate E1/U17 small nucleolar ribonucleoprotein particle

21 January 2018

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The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator

21 January 2018

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Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA

21 January 2018

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Clusters of internally primed transcripts reveal novel long noncoding RNAs

21 January 2018

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The H19 gene: regulation and function of a non-coding RNA.

21 January 2018

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Ashbya Genome Database 3.0: a cross-species genome and transcriptome browser for yeast biologists

21 January 2018

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Non-coding-RNA regulators of RNA polymerase II transcription

21 January 2018

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Widespread distribution of antisense transcripts in the Plasmodium falciparum genome

21 January 2018

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The complexity of the mammalian transcriptome

21 January 2018

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Trf4 and Trf5 proteins of Saccharomyces cerevisiae exhibit poly(A) RNA polymerase activity but no DNA polymerase activity

21 January 2018

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Evidence for abundant transcription of non-coding regions in the Saccharomyces cerevisiae genome

21 January 2018

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Genome Network and FANTOM3: assessing the complexity of the transcriptome

21 January 2018

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Dynamic transcriptome of mice

21 January 2018

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Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray

21 January 2018

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Antisense transcription controls cell fate in Saccharomyces cerevisiae

21 January 2018

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Cellular dynamics of small RNAs

21 January 2018

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RNA-quality control by the exosome

21 January 2018

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Non-coding RNA directed DNA demethylation of Sphk1 CpG island.

21 January 2018

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Identification and expression analysis of putative mRNA-like non-coding RNA in Drosophila.

21 January 2018

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Identification of a novel non-coding RNA, MIAT, that confers risk of myocardial infarction

21 January 2018

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MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer

21 January 2018

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Antisense transcription in the mammalian transcriptome

21 January 2018

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fRNAdb: a platform for mining/annotating functional RNA candidates from non-coding RNA sequences

21 January 2018

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SnoRNP biogenesis meets Pre-mRNA splicing

21 January 2018

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Developmental regulation of EVF-1, a novel non-coding RNA transcribed upstream of the mouse Dlx6 gene

21 January 2018

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RNA degradation by the exosome is promoted by a nuclear polyadenylation complex

21 January 2018

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Radiation leukemia virus common integration at the Kis2 locus: simultaneous overexpression of a novel noncoding RNA and of the proximal Phf6 gene

21 January 2018

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A steroid receptor coactivator, SRA, functions as an RNA and is present in an SRC-1 complex

21 January 2018

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Dynamic developmental regulation of the large non-coding RNA associated with the mouse 7C imprinted chromosomal region.

21 January 2018

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Distinguishing protein-coding from non-coding RNAs through support vector machines

21 January 2018

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Thioredoxin post-transcriptional regulation by H19 provides a new function to mRNA-like non-coding RNA

21 January 2018

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Adenovirus VA1 noncoding RNA can inhibit small interfering RNA and MicroRNA biogenesis

21 January 2018

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Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs

21 January 2018

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Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene

21 January 2018

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Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae.

21 January 2018

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Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript

21 January 2018

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A noncoding RNA is required for the repression of RNApolII-dependent transcription in primordial germ cells.

21 January 2018

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21 January 2018

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The expanding transcriptome: the genome as the 'Book of Sand'

21 January 2018

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siRNA-mediated transcriptional gene silencing: the potential mechanism and a possible role in the histone code

21 January 2018

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The spinocerebellar ataxia 8 noncoding RNA causes neurodegeneration and associates with staufen in Drosophila.

21 January 2018

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Comprehensive comparisons of the current human, mouse, and rat RefSeq, Ensembl, EST, and FANTOM3 datasets: identification of new human genes with specific tissue expression profile

21 January 2018

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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

21 January 2018

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Complete sequencing and characterization of 21,243 full-length human cDNAs

21 January 2018

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RNAdb--a comprehensive mammalian noncoding RNA database

21 January 2018

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Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function

21 January 2018

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MicroRNAs: a developing story

21 January 2018

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Long-range DNase I hypersensitivity mapping reveals the imprinted Igf2r and Air promoters share cis-regulatory elements.

21 January 2018

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Transcription of bxd noncoding RNAs promoted by trithorax represses Ubx in cis by transcriptional interference

21 January 2018

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Contribution of domain structure to the RNA 3' end processing and degradation functions of the nuclear exosome subunit Rrp6p

21 January 2018

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21 January 2018

Non coding RNA and brain

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Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

21 January 2018

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Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer

21 January 2018

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Brain-specific small nucleolar RNAs.

21 January 2018

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The transcriptome of the sea urchin embryo.

21 January 2018

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Gene control by large noncoding RNAs

21 January 2018

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Transcriptional interference--a crash course

21 January 2018

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Identification and characterization of a novel, psoriasis susceptibility-related noncoding RNA gene, PRINS.

21 January 2018

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Transcription termination and nuclear degradation of cryptic unstable transcripts: a role for the nrd1-nab3 pathway in genome surveillance

21 January 2018

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Cytoplasmic decay of intergenic transcripts in Saccharomyces cerevisiae

21 January 2018

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A new yeast poly(A) polymerase complex involved in RNA quality control

21 January 2018

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Prediction of trans-antisense transcripts in Arabidopsis thaliana

21 January 2018

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Activation of the RNA-dependent protein kinase (PKR) of lymphocytes by regulatory RNAs: implications for immunomodulation in HIV infection

21 January 2018

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Sequence-based heuristics for faster annotation of non-coding RNA families.

21 January 2018

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Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

21 January 2018

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The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription

21 January 2018

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tRNA, new aspects in intracellular dynamics

21 January 2018

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Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome

21 January 2018

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The Functional Genomics of Noncoding RNA

21 January 2018

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21 January 2018

Identifiers

DOI

10.1139/O07-061

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17 August 2017

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PubMed ID

17713583