DNA microarray analyses of melanoma gene expression: a decade in the mines (Q36970643)

17 August 2017

1 reference

title

DNA microarray analyses of melanoma gene expression: a decade in the mines (English)

1 reference

17 August 2017

Keith S Hoek

1

1 reference

17 August 2017

1 December 2007

1 reference

Pigment Cell & Melanoma Research

17 August 2017

1 reference

17 August 2017

20

1 reference

17 August 2017

6

1 reference

17 August 2017

466-484

1 reference

Microarray data analysis: from disarray to consolidation and consensus

17 August 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Skin layer-specific transcriptional profiles in normal and recessive yellow (Mc1re/Mc1re) mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Distinct pigmentary and melanocortin 1 receptor-dependent components of cutaneous defense against ultraviolet radiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Genes and pathways downstream of telomerase in melanoma metastasis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Identification of genes down-regulated during melanoma progression: a cDNA array study

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Molecular classification of cutaneous malignant melanoma by gene expression profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Effect of common B-RAF and N-RAS mutations on global gene expression in melanoma cell lines

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Differences in global gene expression in melanoma cell lines with and without homozygous deletion of the CDKN2A locus genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Mitf regulation of Dia1 controls melanoma proliferation and invasiveness

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Differential inhibition of telomerase activity during induction of differentiation in hematopoietic, melanoma, and glioma cells in culture.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Toxicogenomics of kojic acid on gene expression profiling of a375 human malignant melanoma cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Toxicogenomics of A375 human malignant melanoma cells treated with arbutin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Induction of senescence in diterpene ester-treated melanoma cells via protein kinase C-dependent hyperactivation of the mitogen-activated protein kinase pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Distinct sets of genetic alterations in melanoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Mutations of the BRAF gene in human cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Analysis of differential gene expression in human melanocytic tumour lesions by custom made oligonucleotide arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Use of a cDNA microarray to analyse gene expression patterns in human cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

New insight into BRAF mutations in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Parallel expression of alphaIIbbeta3 and alphavbeta3 integrins in human melanoma cells upregulates bFGF expression and promotes their angiogenic phenotype.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

DNA microarrays and likelihood ratio bioinformatic methods: discovery of human melanocyte biomarkers

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Critical review of published microarray studies for cancer outcome and guidelines on statistical analysis and reporting

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

DDEF1 is located in an amplified region of chromosome 8q and is overexpressed in uveal melanoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Role of PLZF in melanoma progression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Pleiotropic effects of the melanocortin 1 receptor (MC1R) gene on human pigmentation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Tumor cell plasticity in uveal melanoma: microenvironment directed dampening of the invasive and metastatic genotype and phenotype accompanies the generation of vasculogenic mimicry patterns

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Interferon-alpha and transforming growth factor-beta co-induce growth inhibition of human tumor cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Multiple markers for melanoma progression regulated by DNA methylation: insights from transcriptomic studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Eugenol causes melanoma growth suppression through inhibition of E2F1 transcriptional activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Culture of melanoma cells in 3-dimensional architectures results in impaired immunorecognition by cytotoxic T lymphocytes specific for Melan-A/MART-1 tumor-associated antigen.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Three-dimensional culture of melanoma cells profoundly affects gene expression profile: a high density oligonucleotide array study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Judging the quality of gene expression-based clustering methods using gene annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Overexpression of Akt converts radial growth melanoma to vertical growth melanoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

The telomere terminal transferase of Tetrahymena is a ribonucleoprotein enzyme with two kinds of primer specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Suppression of human melanoma tumor growth in SCID mice by a human high molecular weight-melanoma associated antigen (HMW-MAA) specific monoclonal antibody

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

The gene expression signatures of melanoma progression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Expression and functional significance of VE-cadherin in aggressive human melanoma cells: role in vasculogenic mimicry

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Why most published research findings are false

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Gene expression signatures for tumor progression, tumor subtype, and tumor thickness in laser-microdissected melanoma tissues

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Gene expression profiling of E2F-1-induced apoptosis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Down-regulation of pro-apoptotic genes is an early event in the progression of malignant melanoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Confirmation of a BRAF mutation-associated gene expression signature in melanoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Limited gene activation in tumor and normal epithelial cells treated with the DNA methyltransferase inhibitor 5-aza-2'-deoxycytidine

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Specific association of human telomerase activity with immortal cells and cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Mechanisms of hypoxic gene regulation of angiogenesis factor Cyr61 in melanoma cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Effect of inhibition of aloe-emodin on N-acetyltransferase activity and gene expression in human malignant melanoma cells (A375.S2).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Vascular channel formation by human melanoma cells in vivo and in vitro: vasculogenic mimicry

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Melanocortin 1 receptor (MC1R) gene variants may increase the risk of melanoma in France independently of clinical risk factors and UV exposure

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Interpretation of microarray data in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Transcriptional regulation of the melanoma prognostic marker melastatin (TRPM1) by MITF in melanocytes and melanoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Vascular endothelial growth factor- and thrombin-induced termination factor, Down syndrome critical region-1, attenuates endothelial cell proliferation and angiogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Rapid identification of dysregulated genes in cutaneous malignant melanoma metastases using cDNA technology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Epigenetic up-regulation of C-C chemokine receptor 7 and C-X-C chemokine receptor 4 expression in melanoma cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Epigenetic silencing of novel tumor suppressors in malignant melanoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Transduction of HOXD3-antisense into human melanoma cells results in decreased invasive and motile activities

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Gene expression profiling in uveal melanoma reveals two molecular classes and predicts metastatic death

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Prognostic testing in uveal melanoma by transcriptomic profiling of fine needle biopsy specimens

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Gene expression profiling in melanoma identifies novel downstream effectors of p14ARF.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Microarray expression profiling in melanoma reveals a BRAF mutation signature.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

The effect of replication on gene expression microarray experiments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

False discovery rate, sensitivity and sample size for microarray studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

High frequency of BRAF mutations in nevi

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Quantitative analysis of MC1R gene expression in human skin cell cultures

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Epigenetic events in malignant melanoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Comprehensive expression profiling of tumor cell lines identifies molecular signatures of melanoma progression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Quantitative monitoring of gene expression patterns with a complementary DNA microarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

TEL/ETV6 is a signal transducer and activator of transcription 3 (Stat3)-induced repressor of Stat3 activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Molecular determinants of human uveal melanoma invasion and metastasis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Gene expression profiling of melanocytic lesions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Pre-B-cell leukemia transcription factor 1 is a major target of promyelocytic leukemia zinc-finger-mediated melanoma cell growth suppression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Novel genes associated with malignant melanoma but not benign melanocytic lesions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Estimation of false discovery rates in multiple testing: application to gene microarray data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

SPRY2 is an inhibitor of the ras/extracellular signal-regulated kinase pathway in melanocytes and melanoma cells with wild-type BRAF but not with the V599E mutant

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Prognostic value of MMP-2 immunoreactive protein (72 kD type IV collagenase) in primary skin melanoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Identification by cDNA microarray technology of genes modulated by artificial ultraviolet radiation in normal human melanocytes: relation to melanocarcinogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Expression profiling reveals that methylation of TIMP3 is involved in uveal melanoma development

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Activated leukocyte cell adhesion molecule/CD166, a marker of tumor progression in primary malignant melanoma of the skin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Role of fascin in filopodial protrusion

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Agouti signal protein regulation in human melanoma cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Downregulation of tissue factor by RNA interference in human melanoma LOX-L cells reduces pulmonary metastasis in nude mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Transcriptomic versus chromosomal prognostic markers and clinical outcome in uveal melanoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Expression profiling of UVB response in melanocytes identifies a set of p53-target genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Retinoic acid receptor-independent mechanism of apoptosis of melanoma cells by the retinoid CD437 (AHPN).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

Gene expression profiling identifies tumour markers potentially playing a role in uveal melanoma development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

In situ expression of transforming growth factor ?? is associated with melanoma progression and correlates with Ki67, HLA-DR and ?? 3 integrin expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1600-0749.2007.00412.X

10.1111/J.1600-0749.2007.00412.X

21 January 2018

Identifiers

DOI

1 reference

17 August 2017

1 reference

PubMed ID

17935490