Single-molecule FRET measures bends and kinks in DNA. (Q36984937)

17 August 2017

Single-molecule FRET measures bends and kinks in DNA. (English)

1 reference

17 August 2017

Anna K Wozniak

1

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17 August 2017

Gunnar F Schröder

2

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17 August 2017

Helmut Grubmüller

3

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17 August 2017

Claus A M Seidel

4

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17 August 2017

Filipp Oesterhelt

5

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17 August 2017

language of work or name

English

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publication date

19 November 2008

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Proceedings of the National Academy of Sciences of the United States of America

17 August 2017

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17 August 2017

105

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17 August 2017

47

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17 August 2017

18337-18342

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Single-molecule tracking of mRNA exiting from RNA polymerase II

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Polyproline and the "spectroscopic ruler" revisited with single-molecule fluorescence.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Accurate FRET measurements within single diffusing biomolecules using alternating-laser excitation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Multiparameter single-molecule fluorescence spectroscopy reveals heterogeneity of HIV-1 reverse transcriptase:primer/template complexes.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Fluorescence energy transfer analysis of DNA structures containing several bulges and their interaction with CAP.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Solution structure of a five-adenine bulge loop within a DNA duplex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

DIAMOD: display and modeling of DNA bending

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

VMD: visual molecular dynamics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Probing the interaction between two single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Observing the helical geometry of double-stranded DNA in solution by fluorescence resonance energy transfer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Bending and curvature calculations in B-DNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Kinking of DNA and RNA helices by bulged nucleotides observed by fluorescence resonance energy transfer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

The orientational freedom of molecular probes. The orientation factor in intramolecular energy transfer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Detecting protein-induced folding of the U4 snRNA kink-turn by single-molecule multiparameter FRET measurements

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Statistical analysis of DNA duplex structural features

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Origin of DNA helical structure and its sequence dependence

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Effect of the orientation of donor and acceptor on the probability of energy transfer involving electronic transitions of mixed polarization

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

DNA-binding orientation and domain conformation of the E. coli rep helicase monomer bound to a partial duplex junction: single-molecule studies of fluorescently labeled enzymes.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2587540

Sequence dependence of the helical repeat of DNA in solution

4 September 2018

1 reference

12 December 2020

Donor-acceptor distance distributions in a double-labeled fluorescent oligonucleotide both as a single strand and in duplexes

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12 December 2020

Bulge-induced bends in RNA: quantification by transient electric birefringence

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12 December 2020

Determination of DNA helical handedness by fluorescence resonance energy transfer

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12 December 2020

Correlation of intrinsic DNA curvature with DNA property periodicity

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12 December 2020

DNA curvature in solution measured by fluorescence resonance energy transfer

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12 December 2020

Single-molecule detection and identification of multiple species by multiparameter fluorescence detection

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12 December 2020

Identifiers

DOI

10.1073/PNAS.0800977105

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17 August 2017

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17 August 2017

PubMed publication ID

19020079

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