DNA mimics for the rapid identification of microorganisms by fluorescence in situ hybridization (FISH). (Q37083226)

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24 January 2020

review article

1 reference

title

DNA mimics for the rapid identification of microorganisms by fluorescence in situ hybridization (FISH) (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19325728%20AND%20SRC:MED&resulttype=core&format=json

24 January 2020

0 references

1

1 reference

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24 January 2020

Nuno F. Azevedo

2

1 reference

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24 January 2020

Carina Almeida

3

1 reference

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24 January 2020

Carina Almeida

4

1 reference

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24 January 2020

Charles W Keevil

6

1 reference

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24 January 2020

Maria João Vieira

7

1 reference

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24 January 2020

author name string

Tatiana Jardim

5

1 reference

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24 January 2020

language of work or name

English

0 references

publication date

20 October 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19325728%20AND%20SRC:MED&resulttype=core&format=json

International Journal of Molecular Sciences

24 January 2020

published in

1 reference

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24 January 2020

volume

9

1 reference

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24 January 2020

issue

10

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24 January 2020

page(s)

1944-1960

1 reference

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Creative Commons Attribution 4.0 International

24 January 2020

copyright license

start time

20 October 2008

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

fluorescence in situ hybridization

1 reference

Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques.

inferred from title

cites work

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Evaluation of peptide nucleic acid-fluorescence in situ hybridization for identification of clinically relevant mycobacteria in clinical specimens and tissue sections

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Inhibition of multiple subtypes of influenza A virus in cell cultures with morpholino oligomers

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Peptide nucleic acid fluorescence in situ hybridization-based identification of Candida albicans and its impact on mortality and antifungal therapy costs

29 September 2017

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Targeting species-specific low-affinity 16S rRNA binding sites by using peptide nucleic acids for detection of Legionellae in biofilms

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Improved in situ hybridization efficiency with locked-nucleic-acid-incorporated DNA probes.

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Hydroxyproline-based DNA mimics provide an efficient gene silencing in vitro and in vivo

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Fluorescence in situ hybridization using peptide nucleic acid probes for rapid detection of Mycobacterium avium subsp. avium and Mycobacterium avium subsp. paratuberculosis in potable-water biofilms

29 September 2017

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Making all parts of the 16S rRNA of Escherichia coli accessible in situ to single DNA oligonucleotides.

29 September 2017

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Quenched autoligation probes allow discrimination of live bacterial species by single nucleotide differences in rRNA.

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Dramatically improved RNA in situ hybridization signals using LNA-modified probes

29 September 2017

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Design and evaluation of 16S rRNA-targeted peptide nucleic acid probes for whole-cell detection of members of the genus Listeria

29 September 2017

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Advantages of peptide nucleic acid oligonucleotides for sensitive site directed 16S rRNA fluorescence in situ hybridization (FISH) detection of Campylobacter jejuni, Campylobacter coli and Campylobacter lari

29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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LNA/DNA chimeric oligomers mimic RNA aptamers targeted to the TAR RNA element of HIV-1.

29 September 2017

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The thermodynamics of DNA structural motifs

29 September 2017

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Quantitative Comparison of Long-wavelength Alexa Fluor Dyes to Cy Dyes: Fluorescence of the Dyes and Their Bioconjugates

29 September 2017

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FISHing with locked nucleic acids (LNA): evaluation of different LNA/DNA mixmers

29 September 2017

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Fluorescence in situ hybridisation for the identification and characterisation of prokaryotes

29 September 2017

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LNA: a versatile tool for therapeutics and genomics

29 September 2017

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PNA and LNA throw light on DNA.

29 September 2017

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Hybridization of 2'-O-methyl and 2'-deoxy molecular beacons to RNA and DNA targets

29 September 2017

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Direct detection and identification of African trypanosomes by fluorescence in situ hybridization with peptide nucleic acid probes

29 September 2017

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Molecular requirements for degradation of a modified sense RNA strand by Escherichia coli ribonuclease H1

29 September 2017

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Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria

29 September 2017

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Fluorescence in situ hybridization with peptide nucleic acid probes for rapid identification of Candida albicans directly from blood culture bottles

29 September 2017

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29 September 2017

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29 September 2017

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PNA for rapid microbiology

29 September 2017

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Differentiation of Candida albicans and Candida dubliniensis by fluorescent in situ hybridization with peptide nucleic acid probes

29 September 2017

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29 September 2017

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Peptide nucleic acid: a versatile tool in genetic diagnostics and molecular biology

29 September 2017

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In situ accessibility of Escherichia coli 23S rRNA to fluorescently labeled oligonucleotide probes

29 September 2017

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Identification of Dekkera bruxellensis (Brettanomyces) from wine by fluorescence in situ hybridization using peptide nucleic acid probes

29 September 2017

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Rapid detection, identification, and enumeration of Pseudomonas aeruginosa in bottled water using peptide nucleic acid probes

29 September 2017

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Morpholino antisense oligomers: the case for an RNase H-independent structural type

29 September 2017

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Potent and nontoxic antisense oligonucleotides containing locked nucleic acids

29 September 2017

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Differentiation of Mycobacterium tuberculosis complex and nontuberculous mycobacterial liquid cultures by using peptide nucleic acid-fluorescence In situ hybridization probes

29 September 2017

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Synthesis of polyacrylamides N-substituted with PNA-like oligonucleotide mimics for molecular diagnostic applications

29 September 2017

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Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes.

29 September 2017

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A formula for thermal stability (Tm) prediction of PNA/DNA duplexes

29 September 2017

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Inhibition of human telomerase by 2'-O-methyl-RNA

29 September 2017

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Advantages of 2'-O-methyl oligoribonucleotide probes for detecting RNA targets

29 September 2017

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A theoretical analysis of specificity of nucleic acid interactions with oligonucleotides and peptide nucleic acids (PNAs).

29 September 2017

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Synthesis and evaluation of some properties of chimeric oligomers containing PNA and phosphono-PNA residues

29 September 2017

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Uniformly modified 2'-deoxy-2'-fluoro phosphorothioate oligonucleotides as nuclease-resistant antisense compounds with high affinity and specificity for RNA targets

29 September 2017

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Antisense oligonucleotides made of 2'-O-alkylRNA: their properties and applications in RNA biochemistry

29 September 2017

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Chemistry and applications of oligonucleotide analogues

29 September 2017

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Characterization of fully 2'-modified oligoribonucleotide hetero- and homoduplex hybridization and nuclease sensitivity

29 September 2017

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Sequence-specific purification of nucleic acids by PNA-controlled hybrid selection

29 September 2017

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Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells

29 September 2017

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Sequence-selective recognition of DNA by strand displacement with a thymine-substituted polyamide

29 September 2017

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Antisense and Antigene Properties of Peptide Nucleic Acids

29 September 2017

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Multicenter evaluation of the Candida albicans/Candida glabrata peptide nucleic acid fluorescent in situ hybridization method for simultaneous dual-color identification of C. albicans and C. glabrata directly from blood culture bottles

29 September 2017

1 reference

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Gene-specific effects of antisense phosphorodiamidate morpholino oligomer-peptide conjugates on Escherichia coli and Salmonella enterica serovar typhimurium in pure culture and in tissue culture.

27 June 2018

1 reference

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Synthesis of a branched locked nucleic acid (LNA) analogue.

27 June 2018

1 reference

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Peptide nucleic acid fluorescence in situ hybridization for rapid detection of Klebsiella pneumoniae from positive blood cultures.

3 September 2018

1 reference

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Recognition of individual genes in a single bacterial cell by fluorescence in situ hybridization--RING-FISH.

3 September 2018

1 reference

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Synthesis of 2'-amino-LNA: a new strategy.

3 September 2018

1 reference

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Identification of indicator microorganisms using a standardized PNA FISH method

3 September 2018

1 reference

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Evaluation of 2'-modified oligonucleotides containing 2'-deoxy gaps as antisense inhibitors of gene expression.

3 September 2018

1 reference

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On the in vitro and in vivo Properties of Four Locked Nucleic Acid Nucleotides Incorporated into an Anti-H-Ras Antisense Oligonucleotide

3 September 2018

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LNA (Locked Nucleic Acid): An RNA Mimic Forming Exceedingly Stable LNA:LNA Duplexes

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS9101944

The first analogues of LNA (Locked Nucleic Acids): Phosphorothioate-LNA and 2′-thio-LNA

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS9101944

Convenient Syntheses of 7-Hydroxy-1-(hydroxymethyl)- 3-(thymin-1-yl)-2,5-dioxabicyclo[2.2.1]heptanes: α-l-Ribo- and α-l-Xylo-Configured LNA Nucleosides

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS9101944

Use of PNA oligonucleotides for the in situ detection of Escherichia coli in water

21 January 2018

1 reference

12 December 2020

Establishment of a continuous model system to study Helicobacter pylori survival in potable water biofilms

1 reference

12 December 2020

Direct detection and identification of Mycobacterium tuberculosis in smear-positive sputum samples by fluorescence in situ hybridization (FISH) using peptide nucleic acid (PNA) probes

1 reference

12 December 2020

Filter-based PNA in situ hybridization for rapid detection, identification and enumeration of specific micro-organisms

1 reference

12 December 2020

Impact of rapid in situ hybridization testing on coagulase-negative staphylococci positive blood cultures

1 reference

12 December 2020

Improved nearest-neighbor parameters for predicting DNA duplex stability

1 reference

12 December 2020

In situ detection of a virulence factor mRNA and 16S rRNA in Listeria monocytogenes

1 reference

12 December 2020

Stability of peptide nucleic acids in human serum and cellular extracts

1 reference

12 December 2020

In situ detection of miRNAs in animal embryos using LNA-modified oligonucleotide probes

1 reference

12 December 2020

https://api.fatcat.wiki/v0/release/nhgxfvg4xfbzziaecctnq2ssu4

Identifiers

1 reference

30 July 2022

release_nhgxfvg4xfbzziaecctnq2ssu4

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/nhgxfvg4xfbzziaecctnq2ssu4

30 July 2022

https://api.fatcat.wiki/v0/release/nhgxfvg4xfbzziaecctnq2ssu4

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/nhgxfvg4xfbzziaecctnq2ssu4

PubMed publication ID

1 reference

30 July 2022