Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis (Q37114917)

18 August 2017

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis (English)

1 reference

18 August 2017

Akihiro Matsui

2

0 references

Motoaki Seki

object named as

Motoaki Seki

13

0 references

Kazuo Shinozaki

object named as

Kazuo Shinozaki

12

0 references

Kousuke Hanada

3

object named as

Kousuke Hanada

1 reference

18 August 2017

11

Tetsuro Toyoda

1 reference

18 August 2017

5

Junko Ishida

1 reference

18 August 2017

9

Yoshiki Mochizuki

1 reference

18 August 2017

6

Taeko Morosawa

1 reference

18 August 2017

8

Eli Kaminuma

1 reference

18 August 2017

4

Makiko Kawashima

1 reference

18 August 2017

Yukio Kurihara

1

1 reference

18 August 2017

Maho Tanaka

7

1 reference

18 August 2017

Akihiro Matsushima

10

1 reference

18 August 2017

language of work or name

English

0 references

publication date

30 January 2009

1 reference

18 August 2017

6

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

18 August 2017

106

1 reference

18 August 2017

7

1 reference

18 August 2017

2453-2458

1 reference

Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array

18 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Inter-kingdom conservation of mechanism of nonsense-mediated mRNA decay

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Highly integrated single-base resolution maps of the epigenome in Arabidopsis

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

mRNA quality control: an ancient machinery recognizes and degrades mRNAs with nonsense codons.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Peptides encoded by short ORFs control development and define a new eukaryotic gene family

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Stability of plant mRNAs depends on the length of the 3'-untranslated region.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Both introns and long 3'-UTRs operate as cis-acting elements to trigger nonsense-mediated decay in plants

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Tiling array-driven elucidation of transcriptional structures based on maximum-likelihood and Markov models

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Nonsense-mediated mRNA decay: molecular insights and mechanistic variations across species

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Empirical analysis of transcriptional activity in the Arabidopsis genome

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

An NMD pathway in yeast involving accelerated deadenylation and exosome-mediated 3'-->5' degradation

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Looking at mRNA decay pathways through the window of molecular evolution

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Functional annotation of a full-length Arabidopsis cDNA collection

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

When the message goes awry: disease-producing mutations that influence mRNA content and performance.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Small peptide regulators of actin-based cell morphogenesis encoded by a polycistronic mRNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

A link between RNA metabolism and silencing affecting Arabidopsis development.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Genome-wide high-resolution mapping of exosome substrates reveals hidden features in the Arabidopsis transcriptome.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

UPF1 is required for nonsense-mediated mRNA decay (NMD) and RNAi in Arabidopsis.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Arabidopsis UPF1 RNA helicase for nonsense-mediated mRNA decay is involved in seed size control and is essential for growth

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

CBP80 promotes interaction of Upf1 with Upf2 during nonsense-mediated mRNA decay in mammalian cells.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2650177

Nonsense-mediated mRNA decay: target genes and functional diversification of effectors

3 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0808902106

UPF3 suppresses aberrant spliced mRNA in Arabidopsis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19181858

12 December 2020

inferred from PubMed ID database lookup

The lba1 mutation of UPF1 RNA helicase involved in nonsense-mediated mRNA decay causes pleiotropic phenotypic changes and altered sugar signalling in Arabidopsis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19181858

12 December 2020

inferred from PubMed ID database lookup

Context analysis of termination codons in mRNA that are recognized by plant NMD

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19181858

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.0808902106

1 reference

18 August 2017

0 references

1 reference

18 August 2017

1 reference