Role of adenine functional groups in the recognition of the 3'-splice-site AG during the second step of pre-mRNA splicing (Q37143270)

18 August 2017

Role of adenine functional groups in the recognition of the 3'-splice-site AG during the second step of pre-mRNA splicing (English)

1 reference

18 August 2017

R K Gaur

1

1 reference

18 August 2017

L Beigelman

series ordinal

2

1 reference

18 August 2017

P Haeberli

series ordinal

3

1 reference

18 August 2017

T Maniatis

series ordinal

4

1 reference

18 August 2017

language of work or name

English

0 references

publication date

1 January 2000

1 reference

Proceedings of the National Academy of Sciences of the United States of America

18 August 2017

1 reference

18 August 2017

97

1 reference

18 August 2017

115-120

1 reference

18 August 2017

1

1 reference

Hydrophobic, Non-Hydrogen-Bonding Bases and Base Pairs in DNA.

18 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Functional interactions of Prp8 with both splice sites at the spliceosomal catalytic center

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Allele-specific genetic interactions between Prp8 and RNA active site residues suggest a function for Prp8 at the catalytic core of the spliceosome.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Mechanical devices of the spliceosome: motors, clocks, springs, and things

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

The structure and function of proteins involved in mammalian pre-mRNA splicing

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Three recognition events at the branch-site adenine.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Interactions between the terminal bases of mammalian introns are retained in inosine-containing pre-mRNAs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Sequential recognition of the pre-mRNA branch point by U2AF65 and a novel spliceosome-associated 28-kDa protein

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

A compensatory base change in U1 snRNA suppresses a 5' splice site mutation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Spliceosome assembly in yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Identification of functional U1 snRNA-pre-mRNA complexes committed to spliceosome assembly and splicing

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Synthesis of RNA containing inosine: analysis of the sequence requirements for the 5′ splice site of theTetrahymenagroup I intron

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Interaction between the first and last nucleotides of pre-mRNA introns is a determinant of 3' splice site selection in S. cerevisiae.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

The interaction between the first and last intron nucleotides in the second step of pre-mRNA splicing is independent of other conserved intron nucleotides

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Synthesis, deprotection, analysis and purification of RNA and ribozymes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

RNA-RNA interactions in the spliceosome: unraveling the ties that bind

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Biochemistry and regulation of pre-mRNA splicing

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Initial splice-site recognition and pairing during pre-mRNA splicing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

The second catalytic step of pre-mRNA splicing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

A U1 snRNA:pre-mRNA base pairing interaction is required early in yeast spliceosome assembly but does not uniquely define the 5' cleavage site.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Recognition of the TACTAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Mutations in U6 snRNA that alter splice site specificity: implications for the active site

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Role of the 3' splice site consensus sequence in mammalian pre-mRNA splicing.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Intron sequences involved in lariat formation during pre-mRNA splicing.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

5' splice site selection in yeast: genetic alterations in base-pairing with U1 reveal additional requirements

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Electrophoretic separation of complexes involved in the splicing of precursors to mRNAs

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

A compensatory base change in human U2 snRNA can suppress a branch site mutation

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

An ATP-independent complex commits pre-mRNA to the mammalian spliceosome assembly pathway

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Site-specific modification of pre-mRNA: the 2'-hydroxyl groups at the splice sites

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

An early hierarchic role of U1 small nuclear ribonucleoprotein in spliceosome assembly.

27 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

Mammalian pre-mRNA branch site selection by U2 snRNP involves base pairing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

Enzymatic RNA synthesis with deoxynucleoside 5'-O-(1-thiotriphosphates).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

Chemical synthesis of oligoribonucleotides containing 2-aminopurine: substrates for the investigation of ribozyme function

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26625

Evidence for an essential non-Watson–Crick interaction between the first and last nucleotides of a nuclear pre-mRNA intron

20 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

A factor, U2AF, is required for U2 snRNP binding and splicing complex assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

Site-specific cross-linking of mammalian U5 snRNP to the 5' splice site before the first step of pre-mRNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

Involvement of U6 snRNA in 5' splice site selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

The organization of 3' splice-site sequences in mammalian introns

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

Importance of specific guanosine N7-nitrogens and purine amino groups for efficient cleavage by a hammerhead ribozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

Synthesis and Structure of 1-Deoxy-1-phenyl-beta-D-ribofuranose and Its Incorporation into Oligonucleotides

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

Bimolecular exon ligation by the human spliceosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.1.115

The U5 and U6 small nuclear RNAs as active site components of the spliceosome

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10618380

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.97.1.115

1 reference

18 August 2017

0 references

1 reference

18 August 2017

1 reference