Imaging HIV-1 RNA dimerization in cells by multicolor super-resolution and fluctuation microscopies (Q37264350)

19 August 2017

Imaging HIV-1 RNA dimerization in cells by multicolor super-resolution and fluctuation microscopies (English)

1 reference

19 August 2017

0 references

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Edouard Bertrand

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Emmanuel Margeat

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Marylene Mougel

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

author name string

Mireia Ferrer

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Caroline Clerté

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Eugenia Basyuk

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Sébastien Lainé

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Jérome Hottin

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

language of work or name

English

0 references

publication date

8 June 2016

1 reference

19 August 2017

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

volume

44

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

issue

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

page(s)

7922-7934

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 4.0 International

8 June 2020

copyright license

start time

11 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5027490/fullTextXML

inferred from PubMed Central ID database lookup

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Dynamics of HIV-1 RNA Near the Plasma Membrane during Virus Assembly

6 September 2017

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Live-cell observation of cytosolic HIV-1 assembly onset reveals RNA-interacting Gag oligomers

6 September 2017

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Global changes in the RNA binding specificity of HIV-1 gag regulate virion genesis

6 September 2017

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Cytoplasmic HIV-1 RNA is mainly transported by diffusion in the presence or absence of Gag protein

6 September 2017

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Role of the nucleocapsid region in HIV-1 Gag assembly as investigated by quantitative fluorescence-based microscopy

6 September 2017

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Identification of pauses during formation of HIV-1 virus like particles

6 September 2017

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Live-cell visualization of pre-mRNA splicing with single-molecule sensitivity

6 September 2017

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6 September 2017

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Dimeric RNA recognition regulates HIV-1 genome packaging

6 September 2017

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A cis-acting element in retroviral genomic RNA links Gag-Pol ribosomal frameshifting to selective viral RNA encapsidation

6 September 2017

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Raster image correlation spectroscopy and number and brightness analysis

6 September 2017

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Opening of the TAR hairpin in the HIV-1 genome causes aberrant RNA dimerization and packaging

6 September 2017

1 reference

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Application of live-cell RNA imaging techniques to the study of retroviral RNA trafficking.

6 September 2017

1 reference

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Identification of a minimal region of the HIV-1 5'-leader required for RNA dimerization, NC binding, and packaging

6 September 2017

1 reference

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Role of HIV-1 RNA and protein determinants for the selective packaging of spliced and unspliced viral RNA and host U6 and 7SL RNA in virus particles

6 September 2017

1 reference

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Flexible nature and specific functions of the HIV-1 nucleocapsid protein

6 September 2017

1 reference

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Real-time imaging of cotranscriptional splicing reveals a kinetic model that reduces noise: implications for alternative splicing regulation

6 September 2017

1 reference

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Analysis of the initiating events in HIV-1 particle assembly and genome packaging

6 September 2017

1 reference

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A guide to super-resolution fluorescence microscopy

6 September 2017

1 reference

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Live-cell coimaging of the genomic RNAs and Gag proteins of two lentiviruses

6 September 2017

1 reference

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Dynamics of HIV-1 assembly and release

6 September 2017

1 reference

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Imaging the interaction of HIV-1 genomes and Gag during assembly of individual viral particles

6 September 2017

1 reference

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Probing the HIV-1 genomic RNA trafficking pathway and dimerization by genetic recombination and single virion analyses

6 September 2017

1 reference

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High efficiency of HIV-1 genomic RNA packaging and heterozygote formation revealed by single virion analysis

6 September 2017

1 reference

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Imaging the biogenesis of individual HIV-1 virions in live cells

6 September 2017

1 reference

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Simultaneous transport of different localized mRNA species revealed by live-cell imaging

6 September 2017

1 reference

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Mapping the number of molecules and brightness in the laser scanning microscope

6 September 2017

1 reference

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The transcriptional cycle of HIV-1 in real-time and live cells.

6 September 2017

1 reference

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Intracellular HIV-1 Gag localization is impaired by mutations in the nucleocapsid zinc fingers.

6 September 2017

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Vif is a RNA chaperone that could temporally regulate RNA dimerization and the early steps of HIV-1 reverse transcription

6 September 2017

1 reference

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A structure-based approach for targeting the HIV-1 genomic RNA dimerization initiation site.

6 September 2017

1 reference

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HIV controls the selective packaging of genomic, spliced viral and cellular RNAs into virions through different mechanisms.

6 September 2017

1 reference

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Dimer initiation signal of human immunodeficiency virus type 1: its role in partner selection during RNA copackaging and its effects on recombination

6 September 2017

1 reference

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Plasma membrane is the site of productive HIV-1 particle assembly

6 September 2017

1 reference

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Trafficking of HIV-1 RNA is mediated by heterogeneous nuclear ribonucleoprotein A2 expression and impacts on viral assembly

6 September 2017

1 reference

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HIV-1 Vpu promotes release and prevents endocytosis of nascent retrovirus particles from the plasma membrane

6 September 2017

1 reference

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HIV-1 Gag-RNA interaction occurs at a perinuclear/centrosomal site; analysis by confocal microscopy and FRET.

6 September 2017

1 reference

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How retroviruses select their genomes

6 September 2017

1 reference

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Evidence for preferential copackaging of Moloney murine leukemia virus genomic RNAs transcribed in the same chromosomal site

6 September 2017

1 reference

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Is HIV-1 RNA dimerization a prerequisite for packaging? Yes, no, probably?

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Dimerization of retroviral RNA genomes: an inseparable pair.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Identification of Staufen in the human immunodeficiency virus type 1 Gag ribonucleoprotein complex and a role in generating infectious viral particles

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Effects of a single amino acid substitution within the p2 region of human immunodeficiency virus type 1 on packaging of spliced viral RNA

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

The dimer initiation sequence stem-loop of human immunodeficiency virus type 1 is dispensable for viral replication in peripheral blood mononuclear cells.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Two alternating structures of the HIV-1 leader RNA

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

The double-stranded RNA-binding protein Staufen is incorporated in human immunodeficiency virus type 1: evidence for a role in genomic RNA encapsidation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Dimerization of HIV-1 genomic RNA of subtypes A and B: RNA loop structure and magnesium binding

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

The human immunodeficiency virus type 1 Gag polyprotein has nucleic acid chaperone activity: possible role in dimerization of genomic RNA and placement of tRNA on the primer binding site

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Localization of ASH1 mRNA particles in living yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Role of the DIS hairpin in replication of human immunodeficiency virus type 1

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Nucleocapsid protein effects on the specificity of retrovirus RNA encapsidation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Sex and recombination in retroviruses

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

The relationship between HIV-1 genome RNA dimerization, virion maturation and infectivity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Murine leukemia virus RNA dimerization is coupled to transcription and splicing processes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Possible role of dimerization in human immunodeficiency virus type 1 genome RNA packaging

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

SIMcheck: a Toolbox for Successful Super-resolution Structured Illumination Microscopy

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

HIV-1 viral RNA is selected in the form of monomers that dimerize in a three-step protease-dependent process; the DIS of stem-loop 1 initiates viral RNA dimerization

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Determination of thermodynamic parameters for HIV DIS type loop-loop kissing complexes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Human immunodeficiency virus type 1 RNA outside the primary encapsidation and dimer linkage region affects RNA dimer stability in vivo

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

A dual role of the putative RNA dimerization initiation site of human immunodeficiency virus type 1 in genomic RNA packaging and proviral DNA synthesis

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Requirements for kissing-loop-mediated dimerization of human immunodeficiency virus RNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Specific recognition of the HIV-1 genomic RNA by the Gag precursor

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

LambdaN-GFP: an RNA reporter system for live-cell imaging

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Role of distal zinc finger of nucleocapsid protein in genomic RNA dimerization of human immunodeficiency virus type 1; no role for the palindrome crowning the R-U5 hairpin

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

HIV-1 genome dimerization: kissing-loop hairpin dictates whether nucleotides downstream of the 5' splice junction contribute to loose and tight dimerization of human immunodeficiency virus RNA.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Non-canonical interactions in a kissing loop complex: the dimerization initiation site of HIV-1 genomic RNA.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Partial colocalization of glucocorticoid and mineralocorticoid receptors in discrete compartments in nuclei of rat hippocampus neurons

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Mapping of nucleocapsid residues important for HIV-1 genomic RNA dimerization and packaging

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Mutational analysis of the bipartite dimer linkage structure of human immunodeficiency virus type 1 genomic RNA.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5027490

Ultrastructure of HIV-1 genomic RNA

3 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27280976

12 December 2020

inferred from PubMed ID database lookup

Formation of immature and mature genomic RNA dimers in wild-type and protease-inactive HIV-1: Differential roles of the Gag polyprotein, nucleocapsid proteins NCp15, NCp9, NCp7, and the dimerization initiation site

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27280976

12 December 2020

inferred from PubMed ID database lookup

A kissing complex together with a stable dimer is involved in the HIV-1Lai RNA dimerization process in vitro

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27280976

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GKW511

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27280976%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

PubMed publication ID

27280976

1 reference