How retroviruses select their genomes (Q36215749)

12 August 2017

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title

How retroviruses select their genomes (English)

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12 August 2017

Victoria D'Souza

1

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12 August 2017

Michael F Summers

series ordinal

2

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12 August 2017

language of work or name

English

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publication date

1 August 2005

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Nature Reviews Microbiology

12 August 2017

published in

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12 August 2017

volume

3

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12 August 2017

issue

8

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12 August 2017

page(s)

643-655

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Demystified. Human endogenous retroviruses

12 August 2017

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In the beginning: genome recognition, RNA encapsidation and the initiation of complex retrovirus assembly

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Is HIV-1 RNA dimerization a prerequisite for packaging? Yes, no, probably?

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The retroviral RNA dimer linkage: different structures may reflect different roles

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21 January 2018

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A retroviral Cys-Xaa2-Cys-Xaa4-His-Xaa4-Cys peptide binds metal ions: spectroscopic studies and a proposed three-dimensional structure

21 January 2018

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21 January 2018

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Point mutants of Moloney murine leukemia virus that fail to package viral RNA: evidence for specific RNA recognition by a "zinc finger-like" protein sequence

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High-resolution structure of an HIV zinc fingerlike domain via a new NMR-based distance geometry approach

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Flexibility in the P2 domain of the HIV-1 Gag polyprotein

21 January 2018

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Dynamical behavior of the HIV-1 nucleocapsid protein

21 January 2018

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Secondary structure analysis of a minimal avian leukosis-sarcoma virus packaging signal

21 January 2018

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Encapsidation sequences for spleen necrosis virus, an avian retrovirus, are between the 5' long terminal repeat and the start of the gag gene

21 January 2018

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Delineation of sequences important for efficient packaging of feline immunodeficiency virus RNA.

21 January 2018

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Mutational analysis of the predicted secondary RNA structure of the Mason-Pfizer monkey virus packaging signal

21 January 2018

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Elucidation of a conserved RNA stem-loop structure in the packaging signal of human immunodeficiency virus type 1.

21 January 2018

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The 17 nucleotides downstream from the env gene stop codon are important for murine leukemia virus packaging

21 January 2018

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Dimerization of retroviral genomic RNAs: structural and functional implications

21 January 2018

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mRNA molecules containing murine leukemia virus packaging signals are encapsidated as dimers

21 January 2018

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Dissociation of genome dimerization from packaging functions and virion maturation of human immunodeficiency virus type 1.

21 January 2018

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Construction of a retrovirus packaging mutant and its use to produce helper-free defective retrovirus

21 January 2018

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Effect of dimerization on the conformation of the encapsidation Psi domain of Moloney murine leukemia virus RNA.

21 January 2018

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Conformational analysis of the 5' leader and the gag initiation site of Mo-MuLV RNA and allosteric transitions induced by dimerization

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO1210

A short autocomplementary sequence in the 5' leader region is responsible for dimerization of MoMuLV genomic RNA.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO1210

Bipartite signal for genomic RNA dimerization in Moloney murine leukemia virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

An additional dimer linkage structure in Moloney murine leukemia virus RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Mutational analysis of stem-loops in the RNA packaging signal of the Moloney murine leukemia virus

21 January 2018

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cis-Acting elements important for retroviral RNA packaging specificity

21 January 2018

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RNA sequences in the Moloney murine leukemia virus genome bound by the Gag precursor protein in the yeast three-hybrid system.

21 January 2018

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Identification of a high affinity nucleocapsid protein binding element within the Moloney murine leukemia virus Psi-RNA packaging signal: implications for genome recognition

21 January 2018

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A retroviral RNA kissing complex containing only two G⋅C base pairs

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO1210

RNA interactions in the 5' region of the HIV-1 genome

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO1210

Structural basis for packaging the dimeric genome of Moloney murine leukaemia virus

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO1210

First glimpses at structure-function relationships of the nucleocapsid protein of retroviruses

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO1210

RNA structure and packaging signals in the 5' leader region of the human immunodeficiency virus type 1 genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Deficient dimerization of human immunodeficiency virus type 1 RNA caused by mutations of the u5 RNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

RNA packaging signal of human immunodeficiency virus type 1

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

5' regions of HIV-1 RNAs are not sufficient for encapsidation: implications for the HIV-1 packaging signal

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO1210

Identification of a binding site for the human immunodeficiency virus type 1 nucleocapsid protein

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO1210

Analysis of binding elements in the human immunodeficiency virus type 1 genomic RNA and nucleocapsid protein

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO1210

Structure of the HIV-1 nucleocapsid protein bound to the SL3 psi-RNA recognition element

21 January 2018

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NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A 19-nucleotide sequence upstream of the 5' major splice donor is part of the dimerization domain of human immunodeficiency virus 1 genomic RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Structure of the intact stem and bulge of HIV-1 Psi-RNA stem-loop SL1

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Cis elements and trans-acting factors involved in the RNA dimerization of the human immunodeficiency virus HIV-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

HIV-1 nucleocapsid protein induces "maturation" of dimeric retroviral RNA in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A proton-coupled dynamic conformational switch in the HIV-1 dimerization initiation site kissing complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Zinc- and sequence-dependent binding to nucleic acids by the N-terminal zinc finger of the HIV-1 nucleocapsid protein: NMR structure of the complex with the Psi-site analog, dACGCC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A heterologous, high-affinity RNA ligand for human immunodeficiency virus Gag protein has RNA packaging activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Sequences downstream of the 5' splice donor site are required for both packaging and dimerization of human immunodeficiency virus type 1 RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Direct probing of RNA structures and RNA-protein interactions in the HIV-1 packaging signal by chemical modification and electrospray ionization fourier transform mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Affinities of packaging domain loops in HIV-1 RNA for the nucleocapsid protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Direct mass spectrometric determination of the stoichiometry and binding affinity of the complexes between nucleocapsid protein and RNA stem-loop hairpins of the HIV-1 Psi-recognition element

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

The leader of the HIV-1 RNA genome forms a compactly folded tertiary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Two alternating structures of the HIV-1 leader RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

In vitro evidence that the untranslated leader of the HIV-1 genome is an RNA checkpoint that regulates multiple functions through conformational changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A riboswitch regulates RNA dimerization and packaging in human immunodeficiency virus type 1 virions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

First snapshots of the HIV-1 RNA structure in infected cells and in virions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

In vitro evidence for a long range pseudoknot in the 5'-untranslated and matrix coding regions of HIV-1 genomic RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A novel long distance base-pairing interaction in human immunodeficiency virus type 1 RNA occludes the Gag start codon

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

The major human immunodeficiency virus type 2 (HIV-2) packaging signal is present on all HIV-2 RNA species: cotranslational RNA encapsidation and limitation of Gag protein confer specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Human immunodeficiency virus type 2 lentivirus vectors for gene transfer: expression and potential for helper virus-free packaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

The dimer initiation site hairpin mediates dimerization of the human immunodeficiency virus, type 2 RNA genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Elements located upstream and downstream of the major splice donor site influence the ability of HIV-2 leader RNA to dimerize in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Regulated HIV-2 RNA dimerization by means of alternative RNA conformations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Mapping the RNA binding sites for human immunodeficiency virus type-1 gag and NC proteins within the complete HIV-1 and -2 untranslated leader regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Yeast three-hybrid screening of rous sarcoma virus mutants with randomly mutagenized minimal packaging signals reveals regions important for gag interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A short autocomplementary sequence plays an essential role in avian sarcoma-leukosis virus RNA dimerization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A study of the dimerization of Rous sarcoma virus RNA in vitro and in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A study of the dimer formation of Rous sarcoma virus RNA and of its effect on viral protein synthesis in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

RNA dimerization defect in a Rous sarcoma virus matrix mutant

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

trans-acting inhibition of genomic RNA dimerization by Rous sarcoma virus matrix mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Mapping the encapsidation determinants of feline immunodeficiency virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

The primary nucleotide sequence of the bovine leukemia virus RNA packaging signal can influence efficient RNA packaging and virus replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Sequences within both the 5′ untranslated region and the Gag gene are important for efficient encapsidation of Mason–Pfizer monkey virus RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Nucleic acid binding-induced Gag dimerization in the assembly of Rous sarcoma virus particles in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Characterization of Rous sarcoma virus Gag particles assembled in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Murine leukemia virus nucleocapsid mutant particles lacking viral RNA encapsidate ribosomes

21 January 2018

1 reference

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An avian oncovirus mutant (SE 21Q1b) deficient in genomic RNA: Biological and biochemical characterization

21 January 2018

1 reference

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A novel nuclear export activity in HIV-1 matrix protein required for viral replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Nuclear entry and CRM1-dependent nuclear export of the Rous sarcoma virus Gag polyprotein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Link between genome packaging and rate of budding for Rous sarcoma virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Retroviral genomic RNAs are transported to the plasma membrane by endosomal vesicles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

NMR structure of the 101-nucleotide core encapsidation signal of the Moloney murine leukemia virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Stem-loop SL4 of the HIV-1 Ψ RNA packaging signal exhibits weak affinity for the nucleocapsid protein. structural studies and implications for genome recognition

21 January 2018

1 reference

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Determination of the structure of the nucleocapsid protein NCp7 from the human immunodeficiency virus type 1 by 1H NMR

21 January 2018

1 reference

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A stem-loop motif formed by the immediate 5' terminus of the bovine viral diarrhea virus genome modulates translation as well as replication of the viral RNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Retroviral RNA dimer linkage

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Duplication of the primary encapsidation and dimer linkage region of human immunodeficiency virus type 1 RNA results in the appearance of monomeric RNA in virions

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Dimerization of MoMuLV genomic RNA: redefinition of the role of the palindromic stem-loop H1 (278-303) and new roles for stem-loops H2 (310-352) and H3 (355-374)

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

A short sequence upstream of the 5' major splice site is important for encapsidation of HIV-1 genomic RNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

NMR analysis of intra- and inter-molecular stems in the dimerization initiation site of the HIV-1 genome

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Alternate usage of two dimerization initiation sites in HIV-2 viral RNA in vitro

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Identification of thein VitroHIV-2/SIV RNA Dimerization Site Reveals Striking Differences with HIV-1

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

Identification of a generalised packaging sequence for D-type retroviruses and generation of a D-type retroviral vector

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

High-molecular-weight RNAs of AKR, NZB, and wild mouse viruses and avian reticuloendotheliosis virus all have similar dimer structures

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Secondary structural features in the 70S RNAs of Moloney murine leukemia and Rous sarcoma viruses as observed by electron microscopy.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Maturation of dimeric viral RNA of Moloney murine leukemia virus.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Nonreciprocal packaging of human immunodeficiency virus type 1 and type 2 RNA: a possible role for the p2 domain of Gag in RNA encapsidation

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Varying the position of a retrovirus packaging sequence results in the encapsidation of both unspliced and spliced RNAs

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Identification of a sequence required for efficient packaging of human immunodeficiency virus type 1 RNA into virions

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Human immunodeficiency virus types 1 and 2 differ in the predominant mechanism used for selection of genomic RNA for encapsidation

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

A role for two hairpin structures as a core RNA encapsidation signal in murine leukemia virus virions.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Point mutations in the avian sarcoma/leukosis virus 3' untranslated region result in a packaging defect

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Reverse transcriptase as the major determinant for selective packaging of tRNA's into Avian sarcoma virus particles

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

A conserved cis-acting sequence in the 5' leader of avian sarcoma virus RNA is required for packaging

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Position dependence of functional hairpins important for human immunodeficiency virus type 1 RNA encapsidation in vivo

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Deficiency of 60 to 70S RNA in murine leukemia virus particles assembled in cells treated with actinomycin D

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Basic amino acids flanking the zinc finger of Moloney murine leukemia virus nucleocapsid protein NCp10 are critical for virus infectivity

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Construction and analysis of deletion mutations in the U5 region of Moloney murine leukemia virus: effects on RNA packaging and reverse transcription.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Evidence that the packaging signal of Moloney murine leukemia virus extends into the gag region

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Mutations of RNA and protein sequences involved in human immunodeficiency virus type 1 packaging result in production of noninfectious virus

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

A mutant of human immunodeficiency virus with reduced RNA packaging and abnormal particle morphology

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Functional analysis of the core human immunodeficiency virus type 1 packaging signal in a permissive cell line

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Mutational analysis of cis-acting packaging signals in human immunodeficiency virus type 1 RNA.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Analysis in human immunodeficiency virus type 1 vectors of cis-acting sequences that affect gene transfer into human lymphocytes.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Efficient encapsidation of human immunodeficiency virus type 1 vectors and further characterization of cis elements required for encapsidation

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

RNA secondary structure and binding sites for gag gene products in the 5' packaging signal of human immunodeficiency virus type 1.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Requirements for kissing-loop-mediated dimerization of human immunodeficiency virus RNA.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Location of cis-acting signals important for RNA encapsidation in the leader sequence of human immunodeficiency virus type 2.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

A minimal avian retroviral packaging sequence has a complex structure

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

An Mpsi-containing heterologous RNA, but not env mRNA, is efficiently packaged into avian retroviral particles

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

In vivo selection of Rous sarcoma virus mutants with randomized sequences in the packaging signal

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Secondary structure model of the Mason-Pfizer monkey virus 5' leader sequence: identification of a structural motif common to a variety of retroviruses

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

Specificity of retroviral RNA packaging

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1210

7 January 2021

A subset of Pr65gag is nucleus associated in murine leukemia virus-infected cells

1 reference

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7 January 2021

Identifiers

DOI

10.1038/NRMICRO1210

1 reference

Dimensions Publication ID

12 August 2017

1019770538

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Fatcat ID

release_deiljaef4bebhaw446nihaq4cq

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/deiljaef4bebhaw446nihaq4cq

24 November 2022

mapped directly with Wikidata item

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