Dynamics and function of compact nucleosome arrays (Q37357366)

19 August 2017

Dynamics and function of compact nucleosome arrays (English)

1 reference

19 August 2017

Michael G Poirier

1

1 reference

19 August 2017

Eugene Oh

series ordinal

2

1 reference

19 August 2017

Hannah S Tims

series ordinal

3

1 reference

19 August 2017

Jonathan Widom

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4

1 reference

19 August 2017

23 August 2009

1 reference

Nature Structural & Molecular Biology

19 August 2017

1 reference

19 August 2017

16

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19 August 2017

9

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19 August 2017

938-944

1 reference

Orientation dependence in fluorescent energy transfer between Cy3 and Cy5 terminally attached to double-stranded nucleic acids

19 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Nucleosome repeat length and linker histone stoichiometry determine chromatin fiber structure

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Spontaneous access to DNA target sites in folded chromatin fibers

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Two strategies for gene regulation by promoter nucleosomes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Transcription and RNAi in heterochromatic gene silencing

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Transcription and RNA interference in the formation of heterochromatin.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Reinterpreting pericentromeric heterochromatin

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Rapid accessibility of nucleosomal DNA in yeast on a second time scale

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Structure of the '30 nm' chromatin fibre: a key role for the linker histone

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

EM measurements define the dimensions of the "30-nm" chromatin fiber: evidence for a compact, interdigitated structure

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Histone H4-K16 acetylation controls chromatin structure and protein interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Histone H1 depletion in mammals alters global chromatin structure but causes specific changes in gene regulation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

X-ray structure of a tetranucleosome and its implications for the chromatin fibre

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Repair of DNA lesions in chromosomal DNA impact of chromatin structure and Cockayne syndrome proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Nucleosome and chromatin fiber dynamics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Cyclization of short DNA fragments and bending fluctuations of the double helix

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Condensed mitotic chromatin is accessible to transcription factors and chromatin structural proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Rapid spontaneous accessibility of nucleosomal DNA.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Nucleosome arrays reveal the two-start organization of the chromatin fiber

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Global nucleosome occupancy in yeast

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Nucleosomes facilitate their own invasion

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Measurement of histone-DNA interaction free energy in nucleosomes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

The structure of DNA in the nucleosome core

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Maintenance of stable heterochromatin domains by dynamic HP1 binding

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Biological and chemical applications of fluorescence correlation spectroscopy: a review

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Kinetics of conformational fluctuations in DNA hairpin-loops

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Synergistic activation of transcription by physiologically unrelated transcription factors through cooperative DNA-binding

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Histone H1 in Saccharomyces cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Binding of disparate transcriptional activators to nucleosomal DNA is inherently cooperative

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Histories H1 and H5: one or two molecules per nucleosome?

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Toward a unified model of chromatin folding

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Direct detection of linker DNA bending in defined-length oligomers of chromatin

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Fluorescence resonance energy transfer and nucleic acids

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Concentration Correlation Spectroscopy: A New Biophysical Probe Based on Occupation Number Fluctuations

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Collaborative competition mechanism for gene activation in vivo

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Spontaneous access of proteins to buried nucleosomal DNA target sites occurs via a mechanism that is distinct from nucleosome translocation

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Molecular arrangement and evolution of heterochromatic DNA

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Mechanism of transcriptional silencing in yeast

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Nucleosomal locations of dominant DNA sequence motifs for histone-DNA interactions and nucleosome positioning

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Cleavage of LexA repressor.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2748796

Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation

2 September 2018

1 reference

A model for the cooperative binding of eukaryotic regulatory proteins to nucleosomal target sites

31 March 2020

1 reference

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

31 March 2020

1 reference

Chromatin Fiber Folding: Requirement for the Histone H4 N-terminal Tail

31 March 2020

1 reference

Trinucleosome compaction studied by fluorescence energy transfer and scanning force microscopy

31 March 2020

1 reference

Nucleosome core particles containing a poly(dA.dT) sequence element exhibit a locally distorted DNA structure

31 March 2020

1 reference

Chromatin structure: linking structure to function with histone H1

31 March 2020

1 reference

Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites

31 March 2020

1 reference

Restriction enzymes as probes of nucleosome stability and dynamics

31 March 2020

1 reference

Lifetime of the histone octamer studied by continuous-flow quasielastic light scattering: test of a model for nucleosome transcription

31 March 2020

1 reference

31 March 2020

Identifiers

DOI

10.1038/NSMB.1650

1 reference

19 August 2017

1 reference

19 August 2017

PubMed publication ID

19701201

1 reference