High throughput characterizations of poly(A) site choice in plants. (Q37510381)

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5 March 2020

title

High throughput characterizations of poly(A) site choice in plants (English)

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5 March 2020

1

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5 March 2020

Qingshun Quinn Li

4

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5 March 2020

Arthur Hunt

5

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5 March 2020

author name string

Pratap Kumar Pati

2

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5 March 2020

Man Liu

3

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publication date

11 July 2013

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5 March 2020

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5 March 2020

volume

67

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issue

1

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5 March 2020

page(s)

74-83

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Widespread and extensive lengthening of 3' UTRs in the mammalian brain

5 March 2020

cites work

1 reference

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All's well that ends well: alternative polyadenylation and its implications for stem cell biology

23 August 2017

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Analysis of alternative cleavage and polyadenylation by 3' region extraction and deep sequencing.

23 August 2017

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Plant polyadenylation factors: conservation and variety in the polyadenylation complex in plants.

23 August 2017

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23 August 2017

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Alternative polyadenylation: new insights from global analyses

23 August 2017

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23 August 2017

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Genetics and regulatory impact of alternative polyadenylation in human B-lymphoblastoid cells

23 August 2017

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An in-depth map of polyadenylation sites in cancer

23 August 2017

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Global patterns of tissue-specific alternative polyadenylation in Drosophila

23 August 2017

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Transcriptome dynamics through alternative polyadenylation in developmental and environmental responses in plants revealed by deep sequencing.

23 August 2017

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Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation.

23 August 2017

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The nuclear RNA polymerase II surveillance system targets polymerase III transcripts

23 August 2017

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Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq

23 August 2017

1 reference

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Comprehensive polyadenylation site maps in yeast and human reveal pervasive alternative polyadenylation

23 August 2017

1 reference

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Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs

23 August 2017

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Alternative polyadenylation of antisense RNAs and flowering time control.

23 August 2017

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Characterization of genes encoding poly(A) polymerases in plants: evidence for duplication and functional specialization

23 August 2017

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Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells

23 August 2017

1 reference

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Regulation of flowering time by RNA processing.

23 August 2017

1 reference

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A polyadenylation factor subunit implicated in regulating oxidative signaling in Arabidopsis thaliana.

23 August 2017

1 reference

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Genome level analysis of rice mRNA 3'-end processing signals and alternative polyadenylation

23 August 2017

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Reverse transcriptase template switching: a SMART approach for full-length cDNA library construction

23 August 2017

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Premature 3'-end formation of CBP1 mRNA results in the downregulation of cytochrome b mRNA during the induction of respiration in Saccharomyces cerevisiae

23 August 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3900603

Regulation of poly(A) site choice of several yeast mRNAs

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3900603

Genome-wide control of polyadenylation site choice by CPSF30 in Arabidopsis.

14 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3900603

Direct sequencing of Arabidopsis thaliana RNA reveals patterns of cleavage and polyadenylation.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3900603

The spen family protein FPA controls alternative cleavage and polyadenylation of RNA.

2 September 2018

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Targeted 3' processing of antisense transcripts triggers Arabidopsis FLC chromatin silencing.

2 September 2018

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PolyA_DB 2: mRNA polyadenylation sites in vertebrate genes

2 September 2018

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Disease resistance in plants that carry a feedback-regulated yeast poly(A) binding protein gene.

2 September 2018

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Compilation of mRNA polyadenylation signals in Arabidopsis revealed a new signal element and potential secondary structures.

2 September 2018

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Novel alternative splicing of mRNAs encoding poly(A) polymerases in Arabidopsis.

2 September 2018

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The effect of alpha-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination.

2 September 2018

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FY is an RNA 3' end-processing factor that interacts with FCA to control the Arabidopsis floral transition.

2 September 2018

1 reference

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The Arabidopsis TT2 gene encodes an R2R3 MYB domain protein that acts as a key determinant for proanthocyanidin accumulation in developing seed

2 September 2018

1 reference

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A modified hot borate method significantly enhances the yield of high-quality RNA from cotton (Gossypium hirsutum L.).

2 September 2018

1 reference

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10.1016/J.YMETH.2013.06.037

2 September 2018

Identifiers

DOI

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5 March 2020

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5 March 2020

PubMed publication ID

23851255

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