The Chd1 chromatin remodeler shifts hexasomes unidirectionally. (Q37580481)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28032848%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

title

The Chd1 chromatin remodeler shifts hexasomes unidirectionally (English)

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4 April 2020

1

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4 April 2020

Sebastian Deindl

series ordinal

3

1 reference

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4 April 2020

Gregory D. Bowman

series ordinal

4

1 reference

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4 April 2020

author name string

Anton Sabantsev

series ordinal

2

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4 April 2020

language of work or name

English

0 references

publication date

29 December 2016

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4 April 2020

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4 April 2020

volume

5

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describes a project that uses

4 April 2020

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5226652/fullTextXML

inferred from PubMed Central ID database lookup

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The Catalytic Subunit of the SWR1 Remodeler Is a Histone Chaperone for the H2A.Z-H2B Dimer

23 August 2017

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ISWI remodelers slide nucleosomes with coordinated multi-base-pair entry steps and single-base-pair exit steps

23 August 2017

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Decoupling nucleosome recognition from DNA binding dramatically alters the properties of the Chd1 chromatin remodeler

23 August 2017

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Regulation of the nucleosome unwrapping rate controls DNA accessibility.

23 August 2017

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Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange

23 August 2017

1 reference

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A key role for Chd1 in histone H3 dynamics at the 3' ends of long genes in yeast

23 August 2017

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Codependency of H2B monoubiquitination and nucleosome reassembly on Chd1.

23 August 2017

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The mechanics behind DNA sequence-dependent properties of the nucleosome

23 August 2017

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Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro

23 August 2017

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Structural Basis of Silencing: Sir3 BAH Domain in Complex with a Nucleosome at 3.0 A Resolution

23 August 2017

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Identification of residues in chromodomain helicase DNA-binding protein 1 (Chd1) required for coupling ATP hydrolysis to nucleosome sliding

23 August 2017

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Mediator coordinates PIC assembly with recruitment of CHD1

23 August 2017

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Extranucleosomal DNA binding directs nucleosome sliding by Chd1

23 August 2017

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A packing mechanism for nucleosome organization reconstituted across a eukaryotic genome

23 August 2017

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Histone H2A C-terminus regulates chromatin dynamics, remodeling, and histone H1 binding

23 August 2017

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The Chromodomains of the Chd1 Chromatin Remodeler Regulate DNA Access to the ATPase Motor

23 August 2017

1 reference

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Structure of RCC1 chromatin factor bound to the nucleosome core particle

23 August 2017

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Dynamics of nucleosome remodelling by individual ACF complexes

23 August 2017

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Mechanism of chromatin remodeling and recovery during passage of RNA polymerase II.

23 August 2017

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High-resolution nucleosome mapping reveals transcription-dependent promoter packaging

23 August 2017

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Role of the polycomb protein EED in the propagation of repressive histone marks

23 August 2017

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Chromatin- and transcription-related factors repress transcription from within coding regions throughout the Saccharomyces cerevisiae genome

23 August 2017

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Multivalent engagement of chromatin modifications by linked binding modules

23 August 2017

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Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II

23 August 2017

1 reference

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Analysis of nucleosome repositioning by yeast ISWI and Chd1 chromatin remodeling complexes

23 August 2017

1 reference

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Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Histone H2B ubiquitylation is associated with elongating RNA polymerase II

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Nucleosomes facilitate their own invasion

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Nucleosomes containing the histone variant H2A.Bbd organize only 118 base pairs of DNA

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Reconstitution of nucleosome core particles from recombinant histones and DNA.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

High-resolution mapping of changes in histone-DNA contacts of nucleosomes remodeled by ISW2

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

GAL4 directs nucleosome sliding induced by NURF.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

CHD1 interacts with SSRP1 and depends on both its chromodomain and its ATPase/helicase-like domain for proper association with chromatin

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Characterization of the imitation switch subfamily of ATP-dependent chromatin-remodeling factors in Saccharomyces cerevisiae

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Histone exchange, chromatin structure and the regulation of transcription

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

The role of the nucleosome acidic patch in modulating higher order chromatin structure

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

CHD1 remodelers regulate nucleosome spacing in vitro and align nucleosomal arrays over gene coding regions in S. pombe.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Preparation of nucleosome core particle from recombinant histones

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Sequence-targeted nucleosome sliding in vivo by a hybrid Chd1 chromatin remodeler

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Crystal structure of the PRC1 ubiquitylation module bound to the nucleosome

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Genome-wide nucleosome specificity and directionality of chromatin remodelers.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Mobility of positioned nucleosomes on 5 S rDNA.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Traceless Synthesis of Asymmetrically Modified Bivalent Nucleosomes.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Asymmetric nucleosomes flank promoters in the budding yeast genome

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Analysis of changes in nucleosome conformation using fluorescence resonance energy transfer

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

High-resolution dynamic mapping of histone-DNA interactions in a nucleosome

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacing

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

On the mechanism of nucleosome assembly by histone chaperone NAP1.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Chromatin remodeling through directional DNA translocation from an internal nucleosomal site

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Distinct activities of CHD1 and ACF in ATP-dependent chromatin assembly.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Spatial contacts and nucleosome step movements induced by the NURF chromatin remodeling complex

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

A nucleosome sliding assay for chromatin remodeling factors

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Site-directed histone-DNA contact mapping for analysis of nucleosome dynamics

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Nucleosome remodeling induced by RNA polymerase II: loss of the H2A/H2B dimer during transcription.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5226652

Interdomain Communication of the Chd1 Chromatin Remodeler across the DNA Gyres of the Nucleosome

1 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.7554%2FELIFE.21356

Nature of the nucleosomal barrier to RNA polymerase II

21 January 2018

1 reference

12 December 2020

Nonblinking and long-lasting single-molecule fluorescence imaging

1 reference

12 December 2020

Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II

1 reference

12 December 2020

Structural analysis of the hexasome, lacking one histone H2A/H2B dimer from the conventional nucleosome

1 reference

12 December 2020

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

1 reference

12 December 2020

Identifiers

DOI

10.7554/ELIFE.21356

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28032848%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28032848%20AND%20SRC:MED&resulttype=core&format=json

4 April 2020

PubMed publication ID

28032848

1 reference