Cytochrome c oxidase: evolution of control via nuclear subunit addition (Q37582018)

21 August 2017

1 reference

title

Cytochrome c oxidase: evolution of control via nuclear subunit addition (English)

1 reference

21 August 2017

Maik Hüttemann

3

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author name string

Denis Pierron

1

1 reference

21 August 2017

Derek E Wildman

2

1 reference

21 August 2017

Gopi Chand Markondapatnaikuni

4

1 reference

21 August 2017

Siddhesh Aras

5

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21 August 2017

Lawrence I Grossman

6

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21 August 2017

language of work or name

English

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publication date

23 July 2011

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21 August 2017

8

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Biochimica et Biophysica Acta

inferred from page(s)

published in

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21 August 2017

1817

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21 August 2017

4

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21 August 2017

590-597

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Regulation of mitochondrial respiration and apoptosis through cell signaling: cytochrome c oxidase and cytochrome c in ischemia/reperfusion injury and inflammation

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1 reference

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Cell evolution: gene transfer agents and the origin of mitochondria

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1 reference

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Ancestral and derived protein import pathways in the mitochondrion of Reclinomonas americana

23 August 2017

1 reference

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Evolutionary constraints of phosphorylation in eukaryotes, prokaryotes, and mitochondria

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1 reference

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Molecular evolution of cytochrome C oxidase underlies high-altitude adaptation in the bar-headed goose

23 August 2017

1 reference

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Origins, evolutionary history, and taxonomic distribution of alternative oxidase and plastoquinol terminal oxidase

23 August 2017

1 reference

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Evolution of macromolecular import pathways in mitochondria, hydrogenosomes and mitosomes

23 August 2017

1 reference

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The reducible complexity of a mitochondrial molecular machine

23 August 2017

1 reference

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Regulation of respiration when the oxygen availability changes.

23 August 2017

1 reference

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Regulation of oxidative phosphorylation, the mitochondrial membrane potential, and their role in human disease.

23 August 2017

1 reference

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Suppression mechanisms of COX assembly defects in yeast and human: insights into the COX assembly process

23 August 2017

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23 August 2017

1 reference

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Molecular evolution of the cytochrome c oxidase subunit 5A gene in primates

23 August 2017

1 reference

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Transcription of mammalian cytochrome c oxidase subunit IV-2 is controlled by a novel conserved oxygen responsive element.

23 August 2017

1 reference

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Why do we still have a maternally inherited mitochondrial DNA? Insights from evolutionary medicine

23 August 2017

1 reference

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HIF-1 regulates cytochrome oxidase subunits to optimize efficiency of respiration in hypoxic cells

23 August 2017

1 reference

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Evolution of the molecular machines for protein import into mitochondria

23 August 2017

1 reference

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Assembly of mitochondrial cytochrome c-oxidase, a complicated and highly regulated cellular process

23 August 2017

1 reference

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Oxygenated complex of cytochrome bd from Escherichia coli: stability and photolability.

23 August 2017

1 reference

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Rapid electrostatic evolution at the binding site for cytochrome c on cytochrome c oxidase in anthropoid primates

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Ortholog search of proteins involved in copper delivery to cytochrome C oxidase and functional analysis of paralogs and gene neighbors by genomic context

23 August 2017

1 reference

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Branched mitochondrial electron transport in the Animalia: presence of alternative oxidase in several animal phyla

23 August 2017

1 reference

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Identification of prokaryotic homologues indicates an endosymbiotic origin for the alternative oxidases of mitochondria (AOX) and chloroplasts (PTOX)

23 August 2017

1 reference

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Mitochondrial DNA-like sequences in the nucleus (NUMTs): insights into our African origins and the mechanism of foreign DNA integration

23 August 2017

1 reference

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Coupling of phosphorylation to electron and hydrogen transfer by a chemi-osmotic type of mechanism

23 August 2017

1 reference

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Cytochrome c oxidase of mammals contains a testes-specific isoform of subunit VIb--the counterpart to testes-specific cytochrome c?

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Adaptive evolution of cytochrome c oxidase subunit VIII in anthropoid primates

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Evidence of en bloc duplication in vertebrate genomes

23 August 2017

1 reference

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Amino acid replacement is rapid in primates for the mature polypeptides of COX subunits, but not for their targeting presequences

23 August 2017

1 reference

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Cytochrome C oxidase and the regulation of oxidative phosphorylation.

23 August 2017

1 reference

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The probability of preservation of a newly arisen gene duplicate

23 August 2017

1 reference

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On the origin of mitosing cells

23 August 2017

1 reference

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Mammalian subunit IV isoforms of cytochrome c oxidase

23 August 2017

1 reference

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Unusual location of a mitochondrial gene. Subunit III of cytochrome C oxidase is encoded in the nucleus of Chlamydomonad algae

23 August 2017

1 reference

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The probability of duplicate gene preservation by subfunctionalization

23 August 2017

1 reference

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Molecular evolution of the COX7A gene family in primates

23 August 2017

1 reference

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23 August 2017

1 reference

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Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

3,5-Diiodothyronine binds to subunit Va of cytochrome-c oxidase and abolishes the allosteric inhibition of respiration by ATP.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Expanding the functional human mitochondrial DNA database by the establishment of primate xenomitochondrial cybrids

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Molecular evolution of cytochrome c oxidase: rate variation among subunit VIa isoforms

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Molecular evolution of cytochrome c oxidase subunit IV: evidence for positive selection in simian primates

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

In vivo control of respiration by cytochrome c oxidase in wild-type and mitochondrial DNA mutation-carrying human cells

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Expression of human cytochrome c oxidase subunits during fetal development

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Possible proton relay pathways in cytochrome c oxidase

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Structures of Metal Sites of Oxidized Bovine Heart Cytochrome c Oxidase at 2.8 Å

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Subunit II of cytochrome c oxidase from Paracoccus denitrificans. DNA sequence, gene expression and the protein

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Cloning and mutagenesis of genes encoding the cytochrome bd terminal oxidase complex in Azotobacter vinelandii: mutants deficient in the cytochrome d complex are unable to fix nitrogen in air

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

The metabolism of lactate

23 August 2017

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Rapid evolution of animal mitochondrial DNA

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Proton pump coupled to cytochrome c oxidase in mitochondria

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Molecular targets of oxidative stress.

23 August 2017

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Mosaic origin of the mitochondrial proteome

9 September 2017

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Comparative genomics of vertebrate Fox cluster loci

9 September 2017

1 reference

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Physiological diversity of mitochondrial oxidative phosphorylation

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Tissue-specific genes for respiratory proteins

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Structure and function of cytochrome c oxidase

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Tight control of mitochondrial membrane potential by cytochrome c oxidase

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Roles for enteric d-type cytochrome oxidase in N2 fixation and microaerobiosis

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Insight into the active-site structure and function of cytochrome oxidase by analysis of site-directed mutants of bacterial cytochrome aa3 and cytochrome bo.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Evolution of the nuclear-encoded cytochrome oxidase subunits in vertebrates

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Alternative oxidase in animals: unique characteristics and taxonomic distribution.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Isolation and analysis of the genes for cytochrome c oxidase in Paracoccus denitrificans.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Variations in the subunit content and catalytic activity of the cytochrome c oxidase complex from different tissues and different cardiac compartments

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Structure/function of oxygen-regulated isoforms in cytochrome c oxidase

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Nuclear genes for cytochrome c oxidase

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Site-directed mutagenesis of highly conserved residues in helix VIII of subunit I of the cytochrome bo ubiquinol oxidase from Escherichia coli: an amphipathic transmembrane helix that may be important in conveying protons to the binuclear center.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Structure and evolution of primate cytochrome c oxidase subunit II gene

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Cytochrome c oxidase subunit VIIa isoforms. Characterization and expression of bovine cDNAs

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Isolation and characterization of COX12, the nuclear gene for a previously unrecognized subunit of Saccharomyces cerevisiae cytochrome c oxidase

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Presteady-state and steady-state kinetic properties of human cytochrome c oxidase. Identification of rate-limiting steps in mammalian cytochrome c oxidase

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

An ancient fission of mitochondrial Cox1.

25 June 2018

1 reference

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Origins. On the origin of eukaryotes.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Isolation of regulatory-competent, phosphorylated cytochrome C oxidase.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

A comparative kinetic analysis of the reactivity of plant, horse, and human respiratory cytochrome c towards cytochrome c oxidase.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

The gain and loss of genes during 600 million years of vertebrate evolution

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Comparison of diverse protein sequences of the nuclear-encoded subunits of cytochrome C oxidase suggests conservation of structure underlies evolving functional sites

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Bacterial Proteins Predisposed for Targeting to Mitochondria

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

A third isoform of cytochrome c oxidase subunit VIII is present in mammals

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Subunit II of cytochrome c oxidase in Chlamydomonad algae is a heterodimer encoded by two independent nuclear genes.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Molecular evolution of cytochrome c oxidase subunit I in primates: is there coevolution between mitochondrial and nuclear genomes?

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Evolutionary rate acceleration of cytochrome c oxidase subunit I in simian primates

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Tissue-specific expression and mapping of the Cox7ah gene in mouse.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

An ancestral mitochondrial DNA resembling a eubacterial genome in miniature

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Substitution of asparagine for aspartate-135 in subunit I of the cytochrome bo ubiquinol oxidase of Escherichia coli eliminates proton-pumping activity.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Evolution of the primate cytochrome c oxidase subunit II gene

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Isolation and properties of cytochrome c oxidase from rat liver and quantification of immunological differences between isozymes from various rat tissues with subunit-specific antisera

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3923406

Tinkering Inside the Organelle

1 September 2018

1 reference

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Mitochondrial genome analysis of Ochotona curzoniae and implication of cytochrome c oxidase in hypoxic adaptation

1 September 2018

1 reference

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Cytochrome c oxidase from eucaryotes but not from procaryotes is allosterically inhibited by ATP

2 October 2018

1 reference

12 December 2020

The reaction of primate cytochromes c with cytochrome c oxidase. Analysis of the polarographic assay

1 reference

12 December 2020

The intramitochondrial ATP/ADP-ratio controls cytochrome c oxidase activity allosterically

1 reference

12 December 2020

Oxygen influences the subunit structure of cytochrome c oxidase in the slime mold Dictyostelium discoideum

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12 December 2020

Expression of cytochrome c oxidase during growth and development of Dictyostelium

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12 December 2020

Detection of antibodies to DNA: a technical assessment

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12 December 2020

Chronic stimulation of rat skeletal muscle induces coordinate increases in mitochondrial and nuclear mRNAs of cytochrome-c-oxidase subunits

1 reference

12 December 2020

Re-Aeration following Hypoxia or Anoxia Leads to Activation of the Antioxidative Defense System in Roots of Wheat Seedlings

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12 December 2020

Evolution of nuclear- and mitochondrial-encoded subunit interaction in cytochrome c oxidase

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Coadaptive evolution in cytochrome c oxidase: 9 of 13 subunits show accelerated rates of nonsynonymous substitution in anthropoid primates

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Cytochrome c oxidase assembly in primates is sensitive to small evolutionary variations in amino acid sequence

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10.1016/J.BBABIO.2011.07.007

Identifiers

DOI

1 reference

21 August 2017

1 reference

21 August 2017

PubMed publication ID

21802404

1 reference