Lung infections in cystic fibrosis: deriving clinical insight from microbial complexity (Q37705435)

22 August 2017

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Lung infections in cystic fibrosis: deriving clinical insight from microbial complexity (English)

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22 August 2017

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22 August 2017

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Alan W Walker

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22 August 2017

Franziska A Stressmann

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2

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PubMed ID

20214537

22 August 2017

Mary P Carroll

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4

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PubMed ID

20214537

22 August 2017

Kenneth D Bruce

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5

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22 August 2017

1 March 2010

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Expert Review of Molecular Diagnostics: new diagnostic technologies are set to revolutionise healthcare

22 August 2017

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22 August 2017

10

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22 August 2017

2

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22 August 2017

187-196

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Managing acute lower respiratory tract infections in an era of antibacterial resistance

22 August 2017

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Was bacterial pneumonia the predominant cause of death in the 1918-1919 influenza pandemic?

21 January 2018

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21 January 2018

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Exacerbations in cystic fibrosis: 2 . prevention.

21 January 2018

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Eradication of early Pseudomonas aeruginosa infection

21 January 2018

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Eradication of early Pseudomonas infection in cystic fibrosis

21 January 2018

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Exacerbations in cystic fibrosis: 3--Management.

21 January 2018

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Antibiotic efficacy in vivo predicted by in vitro activity

21 January 2018

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Pseudomonas aeruginosa and the in vitro and in vivo biofilm mode of growth

21 January 2018

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Culturability of stream bacteria assessed at the assemblage and population levels

21 January 2018

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The microbiota of the gingival crevice area of man. I. Total microscopic and viable counts and counts of specific organisms

21 January 2018

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Studying bacteria in respiratory specimens by using conventional and molecular microbiological approaches

21 January 2018

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Laboratory diagnosis ofMycoplasma pneumoniaeinfection. 4. Antigen capture and PCR-gene amplification for detection of the mycoplasma: problems of clinical correlation

21 January 2018

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Early detection of Pseudomonas aeruginosa--comparison of conventional versus molecular (PCR) detection directly from adult patients with cystic fibrosis (CF)

21 January 2018

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PCR-based assay for differentiation of Pseudomonas aeruginosa from other Pseudomonas species recovered from cystic fibrosis patients

21 January 2018

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Identification of Pseudomonas aeruginosa, Burkholderia cepacia complex, and Stenotrophomonas maltophilia in respiratory samples from cystic fibrosis patients using multiplex PCR.

21 January 2018

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Development and evaluation of a novel multiplex PCR technology for molecular differential detection of bacterial respiratory disease pathogens

21 January 2018

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Molecular diagnostic methods in pneumonia

21 January 2018

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Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology.

21 January 2018

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The real-time polymerase chain reaction

21 January 2018

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Multiplex real-time PCR for detection of respiratory tract infections

21 January 2018

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Molecular diagnosis of bloodstream infections caused by non-cultivable bacteria

21 January 2018

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Bacterial activity in cystic fibrosis lung infections

21 January 2018

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Biological sample collection and processing for molecular epidemiological studies

21 January 2018

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Bio-banking in microbiology: from sample collection to epidemiology, diagnosis and research

21 January 2018

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Molecular monitoring of disinfection efficacy using propidium monoazide in combination with quantitative PCR.

21 January 2018

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Assessing the diagnostic importance of nonviable bacterial cells in respiratory infections

21 January 2018

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Can we take the teeth out of ventilator-associated pneumonia?

21 January 2018

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Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products.

21 January 2018

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Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis

21 January 2018

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Microbial Diversity and Community Structure in Two Different Agricultural Soil Communities

21 January 2018

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characterization of bacterial community diversity in cystic fibrosis lung infections by use of 16s ribosomal DNA terminal restriction fragment length polymorphism profiling

21 January 2018

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Molecular detection of multiple emerging pathogens in sputa from cystic fibrosis patients

21 January 2018

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A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients

21 January 2018

1 reference

Ibis T5000: a universal biosensor approach for microbiology.

21 January 2018

1 reference

Total hip prosthetic joint infection due to Veillonella species

21 January 2018

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Community-acquired Streptococcus mitis meningitis: a case report

21 January 2018

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Community as the unit of pathogenicity: an emerging concept as to the microbial pathogenesis of apical periodontitis

21 January 2018

1 reference

Beyond good and evil in the oral cavity: insights into host-microbe relationships derived from transcriptional profiling of gingival cells

21 January 2018

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Interspecies interactions within oral microbial communities

21 January 2018

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Studying bacterial infections through culture-independent approaches.

21 January 2018

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Recurrent exacerbations affect FEV(1) decline in adult patients with cystic fibrosis

21 January 2018

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Exacerbations in cystic fibrosis. 1: Epidemiology and pathogenesis

21 January 2018

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Genetic adaptation by Pseudomonas aeruginosa to the airways of cystic fibrosis patients

21 January 2018

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Discerning the complexity of community interactions using a Drosophila model of polymicrobial infections

21 January 2018

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Sputum changes associated with therapy for endobronchial exacerbation in cystic fibrosis

21 January 2018

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Anti-inflammatory effects of macrolides--an underappreciated benefit in the treatment of community-acquired respiratory tract infections and chronic inflammatory pulmonary conditions?

21 January 2018

1 reference

Macrolides beyond the conventional antimicrobials: a class of potent immunomodulators

21 January 2018

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Why chronic wounds will not heal: a novel hypothesis

21 January 2018

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Pseudomonas aeruginosa biofilms in the respiratory tract of cystic fibrosis patients.

21 January 2018

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21 January 2018

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Effect of antibiotic co-administration on young and mature biofilms of cystic fibrosis clinical isolates: the importance of the biofilm model

21 January 2018

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Impact of biofilm on the in vitro activity of vancomycin alone and in combination with tigecycline and rifampicin against Staphylococcus aureus

21 January 2018

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Clinically feasible biofilm susceptibility assay for isolates of Pseudomonas aeruginosa from patients with cystic fibrosis

21 January 2018

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Emergence of Scedosporium apiospermum in patients with cystic fibrosis

21 January 2018

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Development of an oligonucleotide array for direct detection of fungi in sputum samples from patients with cystic fibrosis

21 January 2018

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Seasonal influences on fungal community structure in unimproved and improved upland grassland soils.

21 January 2018

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Diversity and ecology of soil fungal communities: increased understanding through the application of molecular techniques

21 January 2018

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Molecular characterization of fungal community dynamics in the initial stages of composting

21 January 2018

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Synergism between fungal enzymes and bacterial antibiotics may enhance biocontrol.

21 January 2018

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Examining the fungal and bacterial niche overlap using selective inhibitors in soil

21 January 2018

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Pseudomonas-Saccharomyces interactions: influence of fungal metabolism on bacterial physiology and survival

21 January 2018

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Infective respiratory exacerbations in young adults with cystic fibrosis: role of viruses and atypical microorganisms

21 January 2018

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Severe viral respiratory infections in infants with cystic fibrosis.

21 January 2018

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Effects of upper respiratory tract infections in patients with cystic fibrosis

21 January 2018

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Association of respiratory viral infections with pulmonary deterioration in patients with cystic fibrosis.

21 January 2018

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Viral and atypical bacterial infections in the outpatient pediatric cystic fibrosis clinic

21 January 2018

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Respiratory viral infection predisposing for bacterial disease: a concise review

21 January 2018

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RSV mediates Pseudomonas aeruginosa binding to cystic fibrosis and normal epithelial cells

21 January 2018

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Respiratory infections in cystic fibrosis patients caused by virus, chlamydia and mycoplasma--possible synergism with Pseudomonas aeruginosa

21 January 2018

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Effect of respiratory virus infections including rhinovirus on clinical status in cystic fibrosis

21 January 2018

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Method for detection of respiratory viruses in the sputa of patients with cystic fibrosis.

21 January 2018

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Rapid detection and identification of 12 respiratory viruses using a dual priming oligonucleotide system-based multiplex PCR assay

21 January 2018

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Detection of respiratory viruses with a multiplex polymerase chain reaction assay (MultiCode-PLx Respiratory Virus Panel) in patients with hematologic malignancies

21 January 2018

1 reference

Quantitative RT real time PCR and indirect immunofluorescence for the detection of human parainfluenza virus 1, 2, 3.

21 January 2018

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Genomic analysis of an emerging multiresistant Staphylococcus aureus strain rapidly spreading in cystic fibrosis patients revealed the presence of an antibiotic inducible bacteriophage

21 January 2018

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Coevolution with viruses drives the evolution of bacterial mutation rates.

21 January 2018

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The effect of a bacteriophage on diversification of the opportunistic bacterial pathogen, Pseudomonas aeruginosa.

21 January 2018

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The biofilm life cycle and virulence of Pseudomonas aeruginosa are dependent on a filamentous prophage

21 January 2018

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Biofilm susceptibility to bacteriophage attack: the role of phage-borne polysaccharide depolymerase

21 January 2018

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Dispersing biofilms with engineered enzymatic bacteriophage

21 January 2018

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Interaction between bacteriophage DMS3 and host CRISPR region inhibits group behaviors of Pseudomonas aeruginosa

21 January 2018

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Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing

21 January 2018

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Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

21 January 2018

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Microbial diversity in the sputum of a cystic fibrosis patient studied with 16S rDNA pyrosequencing

21 January 2018

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A renaissance for the pioneering 16S rRNA gene

21 January 2018

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Accurate determination of microbial diversity from 454 pyrosequencing data

21 January 2018

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Systematic artifacts in metagenomes from complex microbial communities.

21 January 2018

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Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing

21 January 2018

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Statistical methods for detecting differentially abundant features in clinical metagenomic samples

21 January 2018

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ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences

21 January 2018

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Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

21 January 2018

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Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models

21 January 2018

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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

21 January 2018

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Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation

21 January 2018

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Detection of Anaerobic Bacteria in High Numbers in Sputum from Patients with Cystic Fibrosis

21 January 2018

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21 January 2018

Identifiers

DOI

10.1586/ERM.09.81

1 reference

22 August 2017

1 reference

PubMed ID

20214537