Macro lncRNAs: a new layer of cis-regulatory information in the mammalian genome (Q38012332)

27 August 2017

Macro lncRNAs: a new layer of cis-regulatory information in the mammalian genome (English)

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27 August 2017

Philipp M Guenzl

1

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PubMed ID

22617879

27 August 2017

Denise P Barlow

series ordinal

2

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27 August 2017

23 May 2012

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27 August 2017

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27 August 2017

9

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27 August 2017

6

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27 August 2017

731-741

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A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

27 August 2017

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Accurate identification of A-to-I RNA editing in human by transcriptome sequencing

21 January 2018

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Non-coding RNAs as regulators of embryogenesis

21 January 2018

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Long non-coding RNAs: insights into functions

21 January 2018

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Long noncoding RNAs: functional surprises from the RNA world

21 January 2018

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The reality of pervasive transcription

21 January 2018

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Naming 'junk': human non-protein coding RNA (ncRNA) gene nomenclature

21 January 2018

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RNAcentral: A vision for an international database of RNA sequences

21 January 2018

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Small RNAs in early mammalian development: from gametes to gastrulation

21 January 2018

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An epigenetic role for maternally inherited piRNAs in transposon silencing

21 January 2018

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A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?

21 January 2018

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A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA

21 January 2018

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Biology and applications of small nucleolar RNAs.

21 January 2018

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Spliceosome Structure and Function

21 January 2018

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Nuclear organization and dynamics of 7SK RNA in regulating gene expression

21 January 2018

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Dampening DNA binding: a common mechanism of transcriptional repression for both ncRNAs and protein domains

21 January 2018

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Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis

21 January 2018

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Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

21 January 2018

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Structural and functional differences in the long non-coding RNA hotair in mouse and human

21 January 2018

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Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

21 January 2018

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lincRNAs act in the circuitry controlling pluripotency and differentiation

21 January 2018

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Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs

21 January 2018

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Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells

21 January 2018

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Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

21 January 2018

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Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression

21 January 2018

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Modular regulatory principles of large non-coding RNAs

21 January 2018

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Gracefully ageing at 50, X-chromosome inactivation becomes a paradigm for RNA and chromatin control

21 January 2018

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Gene silencing in X-chromosome inactivation: advances in understanding facultative heterochromatin formation

21 January 2018

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The function of non-coding RNAs in genomic imprinting

21 January 2018

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An RNA-Seq strategy to detect the complete coding and non-coding transcriptome including full-length imprinted macro ncRNAs

21 January 2018

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Genomic imprinting: a mammalian epigenetic discovery model

21 January 2018

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Genomic imprinting: the emergence of an epigenetic paradigm.

21 January 2018

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Genomic imprinting: recognition and marking of imprinted loci

21 January 2018

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Elongation of the Kcnq1ot1 transcript is required for genomic imprinting of neighboring genes

21 January 2018

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The non-coding Air RNA is required for silencing autosomal imprinted genes

21 January 2018

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Uncoupling antisense-mediated silencing and DNA methylation in the imprinted Gnas cluster.

21 January 2018

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Genomic imprinting mechanisms in embryonic and extraembryonic mouse tissues

21 January 2018

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Extra-embryonic-specific imprinted expression is restricted to defined lineages in the post-implantation embryo.

21 January 2018

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Imprinted expression of the Igf2r gene depends on an intronic CpG island.

21 January 2018

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Silencing by imprinted noncoding RNAs: is transcription the answer?

21 January 2018

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Limited evolutionary conservation of imprinting in the human placenta

21 January 2018

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Identification of the human homolog of the imprinted mouse Air non-coding RNA.

21 January 2018

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Sequence and functional comparison in the Beckwith-Wiedemann region: implications for a novel imprinting centre and extended imprinting

21 January 2018

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Identification and resolution of artifacts in the interpretation of imprinted gene expression

21 January 2018

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Control of imprinting at the Gnas cluster

21 January 2018

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The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin

21 January 2018

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Imprinting along the Kcnq1 domain on mouse chromosome 7 involves repressive histone methylation and recruitment of Polycomb group complexes.

21 January 2018

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Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation

21 January 2018

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G9a histone methyltransferase contributes to imprinting in the mouse placenta

21 January 2018

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Genome imprinting regulated by the mouse Polycomb group protein Eed

21 January 2018

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Depletion of Kcnq1ot1 non-coding RNA does not affect imprinting maintenance in stem cells

21 January 2018

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RNA interference in human cells is restricted to the cytoplasm

21 January 2018

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Efficient oligonucleotide-mediated degradation of nuclear noncoding RNAs in mammalian cultured cells

21 January 2018

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The mouse insulin-like growth factor type-2 receptor is imprinted and closely linked to the Tme locus

21 January 2018

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Parental imprinting of the mouse insulin-like growth factor II gene.

21 January 2018

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A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome

21 January 2018

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The imprinted Air ncRNA is an atypical RNAPII transcript that evades splicing and escapes nuclear export

21 January 2018

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Allele-specific gene expression in mammals: the curious case of the imprinted RNAs

21 January 2018

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Origin of phenotypes: genes and transcripts

21 January 2018

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Divergent transcription from active promoters

21 January 2018

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Long noncoding RNAs with enhancer-like function in human cells

21 January 2018

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Intragenic enhancers act as alternative promoters

21 January 2018

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

21 January 2018

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Clusters of internally primed transcripts reveal novel long noncoding RNAs

21 January 2018

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The majority of total nuclear-encoded non-ribosomal RNA in a human cell is 'dark matter' un-annotated RNA

21 January 2018

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A downstream CpG island controls transcript initiation and elongation and the methylation state of the imprinted Airn macro ncRNA promoter

21 January 2018

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Antisense RNA in imprinting: spreading silence through Air.

21 January 2018

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Transcriptional interference by RNA polymerase pausing and dislodgement of transcription factors.

21 January 2018

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Silencing and transcriptional properties of the imprinted Airn ncRNA are independent of the endogenous promoter

21 January 2018

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Repetitive elements in imprinted genes.

21 January 2018

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Antisense noncoding RNA promoter regulates the timing of de novo methylation of an imprinting control region.

21 January 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 January 2018

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TopHat: discovering splice junctions with RNA-Seq

21 January 2018

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Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

21 January 2018

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Prader-Willi syndrome and Angelman syndrome

21 January 2018

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The relationship between chromosome structure and function at a human telomeric region

21 January 2018

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Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease

21 January 2018

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Heritable somatic methylation and inactivation of MSH2 in families with Lynch syndrome due to deletion of the 3' exons of TACSTD1.

21 January 2018

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Risk of colorectal and endometrial cancers in EPCAM deletion-positive Lynch syndrome: a cohort study

21 January 2018

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Recurrence and variability of germline EPCAM deletions in Lynch syndrome.

21 January 2018

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Characterization of a germ-line deletion, including the entire INK4/ARF locus, in a melanoma-neural system tumor family: identification of ANRIL, an antisense noncoding RNA whose expression coclusters with ARF.

21 January 2018

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Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA

21 January 2018

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Molecular interplay of the noncoding RNA ANRIL and methylated histone H3 lysine 27 by polycomb CBX7 in transcriptional silencing of INK4a

21 January 2018

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Long non-coding RNA ANRIL is required for the PRC2 recruitment to and silencing of p15(INK4B) tumor suppressor gene

21 January 2018

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Susceptibility to coronary artery disease and diabetes is encoded by distinct, tightly linked SNPs in the ANRIL locus on chromosome 9p.

21 January 2018

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ANRIL expression is associated with atherosclerosis risk at chromosome 9p21.

21 January 2018

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Genome-wide association study identifies five new breast cancer susceptibility loci

21 January 2018

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New common variants affecting susceptibility to basal cell carcinoma

21 January 2018

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Genome-wide association study identifies five susceptibility loci for glioma

21 January 2018

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How stem cells age and why this makes us grow old.

21 January 2018

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Role of noncoding RNA ANRIL in genesis of plexiform neurofibromas in neurofibromatosis type 1.

21 January 2018

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Relationship between CAD risk genotype in the chromosome 9p21 locus and gene expression. Identification of eight new ANRIL splice variants

21 January 2018

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Targeted deletion of the 9p21 non-coding coronary artery disease risk interval in mice

21 January 2018

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RNAi-mediated knockdown of Xist can rescue the impaired postimplantation development of cloned mouse embryos

21 January 2018

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Regulating gene expression through RNA nuclear retention

21 January 2018

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Noncoding RNA gene silencing through genomic integration of RNA destabilizing elements using zinc finger nucleases

21 January 2018

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Long intergenic noncoding RNAs: new links in cancer progression

21 January 2018

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Targeted RNA sequencing reveals the deep complexity of the human transcriptome

21 January 2018

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Molecular biology: RNA discrimination

21 January 2018

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Promoter-driven splicing regulation in fission yeast

21 January 2018

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21 January 2018

Identifiers

DOI

10.4161/RNA.19985

1 reference

27 August 2017

1 reference

PubMed ID

22617879